Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,310,417 IS2 (–) +5 bp coding (560‑564/1533 nt) alsA ← D‑allose ABC transporter ATPase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3186096 =NA (NA)70 (1.910) 54/242 0.0 100% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 4310417 = 0 (0.000)coding (564/1533 nt) alsA D‑allose ABC transporter ATPase
* ? NC_000913 = 43104210 (0.000)42 (1.150) 34/240 0.2 100% coding (560/1533 nt) alsA D‑allose ABC transporter ATPase
?NC_000913 = 4499511 NA (NA)noncoding (1331/1331 nt) IS2 repeat region

Only 100 of 109 total aligned reads displayed.

CGTCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCT  >  NC_000913/4310275‑4310564
                                                                                                                                              |                                                                                                                                                   
ttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGa                                                                                                                                                 <  8:155‑M2/5‑1 (MQ=255)
ttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGa                                                                                                                                                 <  1:59899‑M2/5‑1 (MQ=255)
cGTCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCTCCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCTACTGATTCATGAt                                                                                                                                                <  8:160582‑M1/148‑2 (MQ=255)
    tgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGa                                                                                                                                            >  8:159878‑M2/139‑148 (MQ=255)
        tggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACa                                                                                                                                        <  6:93425‑M2/14‑1 (MQ=255)
        gACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgc                                                                                                                                        <  6:191861‑M1/148‑10 (MQ=255)
                 gtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCAc                                                                                                                              >  5:145810‑M2/126‑149 (MQ=255)
                    tgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGAt                                                                                                                                                >  6:30500‑M2/123‑128 (MQ=255)
                    tgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGAt                                                                                                                                                <  5:30500‑M2/6‑1 (MQ=255)
                    tgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACctc                                                                                                                           >  6:130621‑M2/123‑149 (MQ=255)
                      cgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCtt                                                                                                                         >  7:84629‑M2/121‑149 (MQ=255)
                            tccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTgg                                                                                                                   >  4:122518‑M2/115‑149 (MQ=255)
                                gccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCGCCTCTTTATTGgt                                                                                                                  >  8:62996‑M2/111‑146 (MQ=255)
                                gccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgt                                                                                                                  <  7:62996‑M2/36‑1 (MQ=255)
                                 ccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGAt                                                                                                                                                >  1:21550‑M2/110‑115 (MQ=255)
                                 ccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGAt                                                                                                                                                <  2:21550‑M2/6‑1 (MQ=255)
                                 ccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgt                                                                                                                  <  5:117502‑M2/36‑1 (MQ=255)
                                 ccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgt                                                                                                                  >  6:117502‑M2/110‑145 (MQ=255)
                                 aaaCGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttat                                                                                                               >  1:116169‑M1/1‑114 (MQ=255)
                                            caatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTgg                                                                                                    >  4:70287‑M2/99‑148 (MQ=255)
                                            caatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTgg                                                                                                    <  3:70287‑M2/50‑1 (MQ=255)
                                                     gttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCat                                                                                          >  4:157598‑M2/90‑149 (MQ=255)
                                                     atcaCCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaa                                                                                              <  1:85351‑M1/145‑52 (MQ=255)
                                                     atcaCCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaa                                                                                              >  2:85351‑M1/1‑94 (MQ=255)
                                                     atcaCCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcactt                                                                                                          >  8:49005‑M1/1‑94 (MQ=255)
                                                     atcaCCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcactt                                                                                                          <  7:49005‑M1/133‑40 (MQ=255)
                                                      tcaCCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccg                                                                                         >  2:90862‑M1/1‑93 (MQ=255)
                                                         tccactgactagtctaataactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGGGAGTGAGGAGGTGGGTTCATc                                                                                             <  3:120178‑M2/57‑1 (MQ=255)
                                                         tccaatgactagtcaaaaaactagtattaagactatcacttatttaagtgatataggttgtctggagattcaggtggccactctaCATAATCATAAACAGATAATCCACCTCTATATTGCTGAGTGAGGAGGTGGGTACatccagatc                                                                                       >  4:120178‑M2/86‑144 (MQ=255)
                                                           caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtgagt                                                                                                              >  7:142572‑M2/84‑123 (MQ=255)
                                                           caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtgagt                                                                                                              <  8:142572‑M2/40‑1 (MQ=255)
                                                           caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatgatga                                                                                     <  5:130621‑M2/65‑1 (MQ=255)
                                                           caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatgatg                                                                                      <  3:157598‑M2/64‑1 (MQ=255)
                                                              taGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgc                                                                                  <  2:116169‑M1/148‑64 (MQ=255)
                                                                 ctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACttt                                                                              <  3:122518‑M2/72‑1 (MQ=255)
                                                                 ctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACttt                                                                              <  1:143633‑M2/72‑1 (MQ=255)
                                                                  tagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTg                                                                             <  6:145810‑M2/73‑1 (MQ=255)
                                                                    gtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTgg                                                                            <  3:2914‑M2/74‑1 (MQ=255)
                                                                     tctaaaaactagtattaagactatcacttatttaagtgatattggttgtttggagattcagtgggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTgaggag                                                                                                        <  3:18904‑M2/46‑1 (MQ=255)
                                                                     tctaaaaactagtattaagactatcacttatttaagtgatattggttgtttggagattcagagggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTgaggag                                                                                                        >  4:18904‑M2/74‑119 (MQ=255)
                                                                     tctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtgagt                                                                                                              <  4:18849‑M2/40‑1 (MQ=255)
                                                                     tctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtgagt                                                                                                              >  3:18849‑M2/74‑113 (MQ=255)
                                                                      ctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCAt                                                                         >  7:129584‑M2/73‑149 (MQ=255)
                                                                        aaaTACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaa                                                                                              <  8:55794‑M1/126‑52 (MQ=255)
                                                                           aactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGc                                                                    <  8:129584‑M2/82‑1 (MQ=255)
                                                                                 tattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCACTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGc                                                              >  5:118314‑M2/62‑149 (MQ=255)
                                                                                  attaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGtgagtgag                                                                                                           >  4:132054‑M2/61‑103 (MQ=255)
                                                                                   ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtgagt                                                                                                              >  1:128120‑M2/60‑99 (MQ=255)
                                                                                   ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtgagt                                                                                                              <  2:128120‑M2/40‑1 (MQ=255)
                                                                                   ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgt                                                                                                                  >  4:109253‑M2/60‑95 (MQ=255)
                                                                                   ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgt                                                                                                                  <  3:109253‑M2/36‑1 (MQ=255)
                                                                                     accaatatcacttaaataagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGttt                                                          >  2:52745‑M2/58‑149 (MQ=255)
                                                                                      agactatcacttaattaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGtttt                                                         >  2:136098‑M2/57‑149 (MQ=255)
                                                                                         gCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccaggcatctgttatcac                                                                                                            <  4:102057‑M1/95‑38 (MQ=255)
                                                                                         gCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccaggcatctgttatcac                                                                                                            >  3:102057‑M1/1‑58 (MQ=255)
                                                                                            tcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCACTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAAt                                                   <  6:118314‑M2/99‑1 (MQ=255)
                                                                                             aCTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccatta                                                                                                 >  5:93279‑M1/1‑54 (MQ=255)
                                                                                             aCTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccatta                                                                                                 <  6:93279‑M1/102‑49 (MQ=255)
                                                                                               ttATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaaccc                                                                                                     <  4:56277‑M1/96‑45 (MQ=255)
                                                                                               cttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAAt                                                   >  2:74122‑M2/48‑146 (MQ=255)
                                                                                                ttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGAc                                                                                 <  1:198805‑M2/69‑1 (MQ=255)
                                                                                                ttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGAc                                                                                 >  2:198805‑M2/47‑115 (MQ=255)
                                                                                                     taagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCAt                                          >  8:132613‑M2/42‑149 (MQ=255)
                                                                                                         tataGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggattt                                                                                                                                          >  6:65940‑M1/1‑42 (MQ=255)
                                                                                                         tataGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggattt                                                                                                                                          <  5:65940‑M1/49‑8 (MQ=255)
                                                                                                            tattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCat                                                                                          <  6:59365‑M2/60‑1 (MQ=255)
                                                                                                            tattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCat                                                                                          >  5:59365‑M2/35‑94 (MQ=255)
                                                                                                            tattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTtg                                   >  5:176491‑M2/35‑149 (MQ=255)
                                                                                                            aGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgt                                                                      <  2:76265‑M1/114‑76 (MQ=255)
                                                                                                            aGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgt                                                                      >  1:76265‑M1/1‑39 (MQ=255)
                                                                                                             gACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccat                                  >  3:27516‑M1/1‑38 (MQ=255)
                                                                                                              ttggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTtgt                                  <  1:52745‑M2/116‑1 (MQ=255)
                                                                                                                 gttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCTACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCt                              >  6:114764‑M2/30‑149 (MQ=255)
                                                                                                                 gttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCt                              >  5:112523‑M2/30‑149 (MQ=255)
                                                                                                                    gtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACct                                                                                                                            <  1:87355‑M2/26‑1 (MQ=255)
                                                                                                                    gtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACct                                                                                                                            >  2:87355‑M2/27‑52 (MQ=255)
                                                                                                                    gtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgat                           <  6:112523‑M2/123‑1 (MQ=255)
                                                                                                                      cGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtgg                                                                    <  5:38855‑M1/106‑78 (MQ=255)
                                                                                                                      cGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtgg                                                                    >  6:38855‑M1/1‑29 (MQ=255)
                                                                                                                            ctctTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagat                                                                              <  6:35255‑M1/90‑68 (MQ=255)
                                                                                                                            attcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAg                                             >  3:20555‑M2/19‑123 (MQ=255)
                                                                                                                            attcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAg                                             <  4:20555‑M2/105‑1 (MQ=255)
                                                                                                                             tctTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcg                   >  2:68917‑M1/1‑22 (MQ=255)
                                                                                                                             tctTTACGCAACTGATTCATGAtggatttgccccta                                                                                                                                   <  2:117955‑M1/36‑15 (MQ=255)
                                                                                                                             tctTTACGCAACTGATTCATGAtggatttgccccta                                                                                                                                   <  2:115061‑M1/36‑15 (MQ=255)
                                                                                                                             tctTTACGCAACTGATTCATGAtggatttgccccta                                                                                                                                   >  1:117955‑M1/1‑22 (MQ=255)
                                                                                                                             tctTTACGCAACTGATTCATGAtggatttgccccta                                                                                                                                   >  1:115061‑M1/1‑22 (MQ=255)
                                                                                                                               tttACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcg                   <  1:68917‑M1/146‑127 (MQ=255)
                                                                                                                                agggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatga                                                                                        <  3:27973‑M2/62‑1 (MQ=255)
                                                                                                                                  aCGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtg                                                                     <  2:8395‑M1/93‑77 (MQ=255)
                                                                                                                                  aCGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtg                                                                     >  1:8395‑M1/1‑17 (MQ=255)
                                                                                                                                    ggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCat                                                                                          >  5:145311‑M2/11‑70 (MQ=255)
                                                                                                                                    gCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctc           >  3:88023‑M1/1‑15 (MQ=255)
                                                                                                                                     gccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTgg                                <  2:43601‑M2/118‑1 (MQ=255)
                                                                                                                                     gccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTgg                                >  1:43601‑M2/10‑127 (MQ=255)
                                                                                                                                     cAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagat                                                                              >  1:95804‑M1/1‑14 (MQ=255)
                                                                                                                                       cagtctaCATGATCAGAAAAAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATACATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTtc        <  1:136098‑M2/142‑1 (MQ=255)
                                                                                                                                          tctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCAt                                                                  <  6:152962‑M2/84‑1 (MQ=255)
                                                                                                                                          tctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCAt                                                                  >  5:152962‑M2/5‑88 (MQ=255)
                                                                                                                                           aTTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaag     <  1:90862‑M1/148‑141 (MQ=255)
                                                                                                                                              |                                                                                                                                                   
CGTCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCT  >  NC_000913/4310275‑4310564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.