| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 1,806,309 | IS5 (–) +4 bp | 68.4% | intergenic (‑226/‑58) | ydiY ← / → pfkB | acid‑inducible putative outer membrane protein/6‑phosphofructokinase II |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 9 (0.100) | 9/262 | NT | 59.2% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 1806312 | 6 (0.070) | intergenic (‑229/‑58) | ydiY/pfkB | acid‑inducible putative outer membrane protein/6‑phosphofructokinase II | |||||
| * | ? | NC_000913 | 1806309 = | 6 (0.070) | 17 (0.180) | 14/262 | NT | 73.3% | intergenic (‑226/‑61) | ydiY/pfkB | acid‑inducible putative outer membrane protein/6‑phosphofructokinase II |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
TTCGGGATAAATTTGCGGGGTAATTGTTGCGCTATCGAGAGAGGGCGCAAGTGTCAACGTATAGATACGTACCATCATTTCCTCCTATAGGCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTGAAGAAATTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1806444‑1806309‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTC < NC_000913/2290113‑2289969 TTCGGGATAAATTTGCGGGGTAATTGTTGCGCTATCGAGAGAGGGCGCAAGTGTCAACGTATAGATACGTACCATCATTTCCTCCTATAGGCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTAAAGAAATTAAGGAAGGTGCGAA > 6:374330/1‑148 TTGTTGCGCTATCGAGAGAGGGCGCAAGTGTCAACGTATAGATACGTACCATCATTTCCTCCTATAGGCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTAAAGAAATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGT < 6:224108/149‑1 CGCTATCGAGAGAGGGCGCAAGTGTCAACGTATAGATACGTACCATCATTTCCTCCTATAGGCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTAAAGAAATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCA > 8:288281/1‑149 TCAACGTATAGATACGTACCATCATTTCCTCCTATAGGCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTAAAGAAATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCA < 5:374330/149‑1 AACGTATAGATACGTACCATCATTTCCTCCTATAGGCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTAAAGAAATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATA < 8:179364/135‑1 AACGTATAGATACGTACCATCATTTCCTCCTATAGGCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTAAAGAAATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATA > 7:179364/1‑135 ACGTATAGATACGTACCATCATTTCCTCCTATAGGCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTAAAGAAATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCA < 3:267943/149‑1 GTATAGATACGTACCATCATTTCCTCCTATAGGCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTAAAGAAATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG > 8:329654/1‑139 GTATAGATACGTACCATCATTTCCTCCTATAGGCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTAAAGAAATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG < 7:329654/139‑1 TCCTATAGGCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTAAAGAAATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCA < 6:344321/123‑1 TCCTATAGGCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTAAAGAAATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCA > 5:344321/1‑123 TCCTATAGGCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTAAAGAAATTAAGCAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGA > 6:264411/1‑148 TATAGGCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTAAAGAAATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGT > 4:381413/1‑149 GCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTAAAGAAATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAAT > 3:110185/1‑148 AAGTAAAGAATTTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAG < 5:264411/149‑1 aAAGAAATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCG < 2:282809/128‑1 aAAGAAATTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCG > 1:282809/2‑129 TTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTC < 5:58297/149‑1 TTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTC > 5:429782/1‑144 TTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTC < 6:429782/144‑1 TTCGGGATAAATTTGCGGGGTAATTGTTGCGCTATCGAGAGAGGGCGCAAGTGTCAACGTATAGATACGTACCATCATTTCCTCCTATAGGCTGATTTCAGTCTGGCACCGAATCAGCGGAAAGTGAAGAAATTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1806444‑1806309‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTC < NC_000913/2290113‑2289969 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |