New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 425262263 (1.490)5 (0.120) 5/240 3.9 8.4% coding (117/498 nt) ubiC chorismate‑‑pyruvate lyase
?NC_000913 = 4252634 49 (1.210)coding (129/498 nt) ubiC chorismate‑‑pyruvate lyase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4252473‑4252622
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttttTCCCTGCTGTTCAAAACGTTTTGTCATGGAATCCTCCAGCAACAGCCAGTCGAGCAGTTGCGGATCCAGGGCAGGGATCTCTTTACAATAGCGCAGCGCACGCAGTTGCGTTAACGCGGGGTGTGACATGCCGAACTCTCCGTT  <  NC_000913/4252634‑4252491
                                                                                                                                                                                                                                                                                                      
AATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT                                                                                                                                                   >  1:80625/1‑149
 ATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTT                                                                                                                                                  <  2:125869/149‑1
 ATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTT                                                                                                                                                  <  6:51546/149‑1
                                CATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTTTCCCTGCTGTTCAAAACGTTTTGTCATGGAA                                                                                                                   <  2:166583/149‑1
                                     CACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTTTCCCTGCTGTTCAAAACGTT                                                                                                                              <  8:108912/133‑1
                                     CACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTTTCCCTGCTGTTCAAAACGTT                                                                                                                              >  7:108912/1‑133
                                        ACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT                                                                                                                                                   <  2:43846/109‑1
                                        ACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT                                                                                                                                                   >  1:43846/1‑109
                                                                             TAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTTTCCCTGCTGTTCAAAACGTTTT                                                                                                                            <  3:101609/95‑1
                                                                             TAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTTTCCCTGCTGTTCAAAACGTTTT                                                                                                                            >  4:101609/1‑95
                                                                               AAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT                                                                                                                                                   <  8:26874/70‑1
                                                                               AAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT                                                                                                                                                   >  7:26874/1‑70
                                                                                                                                                CGTTTTTCCCTGCTGTTCAAAACGTTTTGTCATGGAATCCTCCAGCAACAGCCAGTCGAGCAGTTGCGGATCCAGGGCAGGGAT                                                                    >  3:15550/1‑84
                                                                                                                                                CGTTTTTCCCTGCTGTTCAAAACGTTTTGTCATGGAATCCTCCAGCAACAGCCAGTCGAGCAGTTGCGGATCCAGGGCAGGGAT                                                                    <  4:15550/84‑1
                                                                                                                                                 GTTTTTCCCTGCTGTTCAAAACGTTTTGTCATGGAATCCTCCAGCAACAGCCAGTCGAGCAGTTGCGGATCCAGGGCAGGGATCTCTTTACAATAGCGCAGCGCACGCAGTTGCGTTAACGCGGGGTGTGACATGCCGAACTCTCCGTT  <  6:112783/149‑1
                                                                                                                                                  TTTTTCCCTGCTGTTCAAAACGTTTTGTCATGGAATCCTCCAGCAACAGCCAGTCGAGCAGTTGCGGATCCAGGGCAGGGATCTCTTTACAATAGCGCAGCGCACGCAGTTGCGTTAACGCG                            <  2:65447/122‑1
                                                                                                                                                  TTTTTCCCTGCTGTTCAAAACGTTTTGTCATGGAATCCTCCAGCAACAGCCAGTCGAGCAGTTGCGGATCCAGGGCAGGGATCTCTTTACAATAGCGCAGCGCACGCAGTTGCGTTAACGCG                            >  1:65447/1‑122
                                                                                                                                                                                                                                                                                                      
AATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4252473‑4252622
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttttTCCCTGCTGTTCAAAACGTTTTGTCATGGAATCCTCCAGCAACAGCCAGTCGAGCAGTTGCGGATCCAGGGCAGGGATCTCTTTACAATAGCGCAGCGCACGCAGTTGCGTTAACGCGGGGTGTGACATGCCGAACTCTCCGTT  <  NC_000913/4252634‑4252491

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.