Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 1,335,762 IS5 (–) +4 bp 100% intergenic (+304/‑66) yciX → / → acnA uncharacterized protein/aconitate hydratase 1; aconitase A

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1335762 =0 (0.000)103 (1.130) 72/244 NT 100% intergenic (+304/‑69) yciX/acnA uncharacterized protein/aconitate hydratase 1; aconitase A
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 13357650 (0.000)97 (1.070) 65/244 NT 100% intergenic (+307/‑66) yciX/acnA uncharacterized protein/aconitate hydratase 1; aconitase A
?NC_000913 2101749 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

Only 100 of 221 total aligned reads displayed.

GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTG  >  NC_000913/1335622‑1335912
                                                                                                                                               |                                                                                                                                                   
 tCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTGGTTATCAAATCGTTACGCGATGTTTGgga                                                                                                                                                  <  1:392‑M1/146‑4 (MQ=255)
 aaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTa                                                                                                                                                <  1:263652‑M1/9‑1 (MQ=255)
        cttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTaa                                                                                                                                         <  3:148639‑M1/16‑1 (MQ=255)
         cttctGGGCCGAACTCCTCTGGATCATTACTAACTTATACTTGACCCCGCTGCGGCGGGGGTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgataa                                                                                                                                         >  3:180389‑M1/1‑135 (MQ=255)
          tttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAata                                                                                                                                       <  7:442431‑M1/18‑1 (MQ=255)
               ggCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGGTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcgg                                                                                                                                  <  5:334894‑M1/148‑20 (MQ=255)
                gCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggg                                                                                                                                 >  6:290232‑M1/1‑128 (MQ=255)
                    gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTg                                                                                                                              <  3:387542‑M1/27‑1 (MQ=255)
                      ctcctcTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaatt                                                                                                                           >  6:252093‑M1/1‑122 (MQ=255)
                        cctcTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattct                                                                                                                         >  6:346158‑M1/1‑120 (MQ=255)
                        cctcTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaa                                                                                                                                                 >  5:245492‑M1/1‑120 (MQ=255)
                         ctctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattct                                                                                                                         <  1:350430‑M1/147‑29 (MQ=255)
                         ctctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattct                                                                                                                         <  2:308267‑M1/147‑29 (MQ=255)
                         ctctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGACATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattct                                                                                                                         <  8:116880‑M1/147‑29 (MQ=255)
                            tGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctc                                                                                                                     >  8:226896‑M1/1‑116 (MQ=255)
                              actgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATc                                                                                                                     >  2:394036‑M1/111‑146 (MQ=255)
                                tCATTACTCACTGATCCTAGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCTAATGGTTACGGGATGTTTGggaaggtgcgattaagcggggaaattcttctcggct                                                                                                                 >  7:334007‑M1/1‑112 (MQ=255)
                                 gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGaa                                                                                                                       >  4:373564‑M1/108‑141 (MQ=255)
                                 gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATc                                                                                                                     >  1:329082‑M1/108‑143 (MQ=255)
                                 gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGc                                                                                                                <  2:102159‑M1/41‑1 (MQ=255)
                                        tcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTg                                                                                                                              >  8:248537‑M1/101‑127 (MQ=255)
                                          cTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtca                                                                                                       >  1:28409‑M1/1‑102 (MQ=255)
                                          cTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaat                                                                                                                                        >  5:372511‑M1/1‑102 (MQ=255)
                                          actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAcc                                                                                                       >  1:102159‑M1/99‑148 (MQ=255)
                                          actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAcc                                                                                                       >  5:270594‑M1/99‑148 (MQ=255)
                                             aTCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                                                                                    <  5:359510‑M1/148‑50 (MQ=255)
                                              tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTg                                                                                                    >  3:279482‑M1/95‑147 (MQ=255)
                                              tCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc                                                                                                   <  7:226896‑M1/148‑51 (MQ=255)
                                                  caaccCCGCCGCAGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt                                                                                               >  3:207606‑M1/3‑94 (MQ=255)
                                                   gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTa                                                                                              >  1:440256‑M1/90‑148 (MQ=255)
                                                   gACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc                                                                                              >  8:330313‑M1/1‑93 (MQ=255)
                                                    aaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTaa                                                                                             >  6:114116‑M1/89‑148 (MQ=255)
                                                      ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagg                                                                                           >  1:140774‑M1/87‑148 (MQ=255)
                                                       ccGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttca                                                                                          >  5:405934‑M1/1‑89 (MQ=255)
                                                       ccGCTGAGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgattaagcggggaaattcttctcggctgactcagtcatttcatttcttca                                                                                          >  8:214411‑M1/1‑89 (MQ=255)
                                                        taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggag                                                                                         <  5:109730‑M1/64‑1 (MQ=255)
                                                        cGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcat                                                                                         <  5:48003‑M1/148‑61 (MQ=255)
                                                            ttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGc                                                                                     >  4:321308‑M1/81‑148 (MQ=255)
                                                             tgatgactcatgatgaacgctgttctatggcaccagatgacaaacatgatctcatatcagggacttggtcgcaccttccTTTGTGGAATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTCTCATTaagcaggacc                                                                                     <  4:390601‑M1/68‑3 (MQ=255)
                                                              gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCt                                                                                    >  4:354451‑M1/79‑147 (MQ=255)
                                                               atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTa                                                                                   >  4:148639‑M1/78‑147 (MQ=255)
                                                               atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTAt                                                                                  <  8:363669‑M1/71‑1 (MQ=255)
                                                               atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTAt                                                                                  <  3:224034‑M1/71‑1 (MQ=255)
                                                                 gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATg                                                                                 >  4:224034‑M1/76‑147 (MQ=255)
                                                                   ggTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctg                                                                                                                >  2:324804‑M1/1‑77 (MQ=255)
                                                                    tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTa                                                                                                                                          >  7:110025‑M1/73‑87 (MQ=255)
                                                                      atgatgaaccctgttctatggctcaagatgacaaacatgatctcatatcagggacttgttcgctccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtcgt                                                                             >  8:435641‑M1/71‑146 (MQ=255)
                                                                       gTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc                                                                                                   <  3:337970‑M1/123‑51 (MQ=255)
                                                                        gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAccc                                                                                                      <  6:421365‑M1/51‑1 (MQ=255)
                                                                        gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAccc                                                                                                      >  5:421365‑M1/69‑119 (MQ=255)
                                                                          aTTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt                                                                        <  7:422457‑M1/147‑78 (MQ=255)
                                                                            ttgctttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtt                                                                                      <  5:83444‑M1/131‑64 (MQ=255)
                                                                                ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTAc                                                                    <  7:414223‑M1/85‑1 (MQ=255)
                                                                                  tgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta                                                                >  2:120121‑M1/1‑62 (MQ=255)
                                                                                  gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACgag                                                                 <  7:20567‑M1/88‑1 (MQ=255)
                                                                                   gcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa                                                               <  2:28409‑M1/147‑87 (MQ=255)
                                                                                    ccACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa                                                              <  5:125951‑M1/147‑88 (MQ=255)
                                                                                           ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg                                                      <  6:198166‑M1/99‑1 (MQ=255)
                                                                                             ttCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                     <  1:183503‑M1/115‑65 (MQ=255)
                                                                                                gatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTTAGGAGGAGCTATGTAGTCAACCCTACGAGAAGCAAGTAAGTacac                                                 <  1:169957‑M1/104‑1 (MQ=255)
                                                                                                 cctcTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc                                                >  6:87792‑M1/1‑47 (MQ=255)
                                                                                                  ctctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcc                                               >  2:20252‑M1/1‑46 (MQ=255)
                                                                                                    ctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGcgaaggtgcgaataagaggggaaattcttctcggctgactcagtcatttaatttcttcatgtttgagccgattttatctcccgtaaatgcgttcaatcagccta                                             >  6:312612‑M1/1‑44 (MQ=255)
                                                                                                     caaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGc                                            >  6:38150‑M1/40‑148 (MQ=255)
                                                                                                     caaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGc                                            >  8:20567‑M1/40‑148 (MQ=255)
                                                                                                      tttATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa                                                               <  6:187045‑M1/128‑87 (MQ=255)
                                                                                                        tATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                          <  4:40108‑M1/147‑108 (MQ=255)
                                                                                                        tATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                          <  3:398699‑M1/147‑108 (MQ=255)
                                                                                                        tATCAATTTGGGGTGGTTTCAAATCGTTACTCGAGGTGTGggaatgttcgaaatagcggggaaattcttctcggctgtctcagtcatttcatttcttcatttttgagccgattttttctcccgtaaatgccttgaatcagcctattt                                          <  5:312612‑M1/147‑108 (MQ=255)
                                                                                                        acatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAgg                                         <  3:411244‑M1/112‑1 (MQ=255)
                                                                                                             atctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCa                                      <  7:91228‑M1/115‑1 (MQ=255)
                                                                                                              tttGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgt                                   >  8:177008‑M1/1‑34 (MQ=255)
                                                                                                              tctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCa                                      <  8:64831‑M1/115‑1 (MQ=255)
                                                                                                                  ggTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc                                <  7:214411‑M1/147‑118 (MQ=255)
                                                                                                                  atatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATaa                               >  6:10371‑M1/27‑148 (MQ=255)
                                                                                                                   tatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATaa                               <  7:261286‑M1/122‑1 (MQ=255)
                                                                                                                      gttATCAAATCGTTACGCGATGTTTGggaaggttcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcatatttagaccgtttcttcg                            <  4:180389‑M1/147‑122 (MQ=255)
                                                                                                                       ttATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc                          <  8:273958‑M1/148‑124 (MQ=255)
                                                                                                                       agggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGCGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAACACt                           <  6:68634‑M1/126‑1 (MQ=255)
                                                                                                                          tCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattt                       <  1:324256‑M1/148‑127 (MQ=255)
                                                                                                                          gacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAcc                       >  8:414223‑M1/19‑148 (MQ=255)
                                                                                                                            aaaTCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                     <  7:295884‑M1/148‑129 (MQ=255)
                                                                                                                            aaaTCGTTACGAGATGTTTGggaaggtgctaataagcggggaaattcttctcgtctgactaagtcatttcttttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                     <  6:370967‑M1/148‑129 (MQ=255)
                                                                                                                             aaTCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttgatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa                    <  8:31761‑M1/148‑130 (MQ=255)
                                                                                                                              tgttcgcaccttccTTTGTGTTATCTTTTATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACGCGTTGc                                            >  7:325310‑M1/15‑123 (MQ=255)
                                                                                                                              tgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGc                                            <  8:356408‑M1/109‑1 (MQ=255)
                                                                                                                              tgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGc                                            >  7:356408‑M1/15‑123 (MQ=255)
                                                                                                                                     accttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCact                    >  7:58726‑M1/8‑140 (MQ=255)
                                                                                                                                     accttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCact                    <  8:58726‑M1/133‑1 (MQ=255)
                                                                                                                                      ccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCATCCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCactact                 <  7:150727‑M1/136‑1 (MQ=255)
                                                                                                                                      ccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCATCCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCactact                 >  8:150727‑M1/7‑142 (MQ=255)
                                                                                                                                        ttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTg         <  5:215766‑M1/144‑1 (MQ=255)
                                                                                                                                         tccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGc        <  6:243477‑M1/145‑1 (MQ=255)
                                                                                                                                              tgtgTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGc     <  8:91228/146‑1 (MQ=255)
                                                                                                                                               gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt  >  6:322504‑M1/1‑1 (MQ=255)
                                                                                                                                               gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt   <  1:54335‑M1/147‑147 (MQ=255)
                                                                                                                                               gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt   <  7:99218‑M1/147‑147 (MQ=255)
                                                                                                                                               gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt   <  3:290283‑M1/147‑147 (MQ=255)
                                                                                                                                               gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt   <  4:248129‑M1/147‑147 (MQ=255)
                                                                                                                                               gggaaggggcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatttttgtgccgattttttcttccgtaattgccttgtttcagcctatttagaccgtttcttcggcatttaaggcgttatccccagttt   <  2:147868‑M1/147‑147 (MQ=255)
                                                                                                                                               |                                                                                                                                                   
GTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTG  >  NC_000913/1335622‑1335912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.