| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,216,925 | A→G | 5.7% | P161P (CCT→CCC) | yehX ← | putative ABC transporter ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,216,925 | 0 | A | G | 5.7% | 268.4 / 3.8 | 87 | P161P (CCT→CCC) | yehX | putative ABC transporter ATPase |
| Reads supporting (aligned to +/- strand): ref base A (37/44); new base G (3/2); total (40/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGATCCATCAATACCAGATGTTCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGA > NC_000913/2216779‑2217072 | tGATCCATCAATACCAGATGTTCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAgg > 7:72892/1‑149 (MQ=255) ccATCAATACCAGATGTTCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCa > 3:59129/1‑149 (MQ=255) aTCAATACCAGATGTTCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATc < 5:372897/149‑1 (MQ=255) cAATACCAGATGTTCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCGAAAAGGTTCATCCa < 2:196052/149‑1 (MQ=255) aaTACCAGATGTTCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCAt > 7:314782/1‑149 (MQ=255) aaTACCAGATGTGCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCAt < 2:197658/149‑1 (MQ=255) aTACCAGATGTTCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCAt < 7:257081/148‑1 (MQ=255) aTACCAGATGTTCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCAt > 8:257081/1‑148 (MQ=255) tACCAGATGTTCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTa < 8:146465/149‑1 (MQ=255) aGATGTTCTGCCCGCCGTAGCGCCTCATCAATATCATGAGTGACCATCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATATCTTGTTGCATCGCGGCGCGCGTTACCGGGTCCAGGTCGCCAAAAGGTTCATCCATTAGTaa < 8:92574/149‑1 (MQ=255) tGTTCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGAc < 5:380244/149‑1 (MQ=255) gTTCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACt > 8:119779/1‑149 (MQ=255) ttCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTa > 4:172033/1‑140 (MQ=255) ttCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTa < 3:172033/140‑1 (MQ=255) tCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACAGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAgcc > 2:203376/1‑144 (MQ=255) tCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACAGGGGCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGAc < 1:203376/146‑1 (MQ=255) cTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTg < 8:379511/148‑1 (MQ=255) ccAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGc < 1:38219/146‑1 (MQ=255) aGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATc < 7:70103/149‑1 (MQ=255) aGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAAAGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGAAAGACTAGCGGATc > 7:210812/1‑149 (MQ=255) cgcCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCa < 5:382628/149‑1 (MQ=255) cgcCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGAAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCa < 4:59129/149‑1 (MQ=255) gcCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAg > 6:26285/1‑149 (MQ=255) tcaATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCa < 6:190321/115‑1 (MQ=255) tcaATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCa > 5:190321/1‑115 (MQ=255) tcaATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCAcg < 8:73906/149‑1 (MQ=255) aaTATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCCGTGCGCCAAAAGGTTCATCCAGTAGTAAGAGTTGCGGATCGGCAGCCAGTGCAcgcg > 2:320566/1‑149 (MQ=255) atatCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACgcgc < 7:119779/149‑1 (MQ=255) atatCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACgcgc < 4:275206/149‑1 (MQ=255) gAGTGACCAGCACAATGGTACGCCCCAGCACACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGAAAGACATGCGGATCGGCACCCAGTGCACCCGCCACTcc > 5:173076/1‑148 (MQ=255) tGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAGGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCcaca > 8:381454/1‑149 (MQ=255) tGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAGGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCcaca < 7:375803/149‑1 (MQ=255) tGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAGGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCcaca < 7:381454/149‑1 (MQ=255) tGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAGGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCcaca > 8:375803/1‑149 (MQ=255) ccAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGt > 5:122316/1‑149 (MQ=255) ccAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGt > 6:225595/1‑149 (MQ=255) cAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTACCACACGtt > 6:147343/1‑149 (MQ=255) acaATGGTACGCCCCAGCAAACGGTGAATGCGCGTCCTCTCTTGTTGCAACGCGCCGCTCGTTACCGGGGCCAGTGCGCCAAACGGTGCATCCATTCGTAAGACATGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTtgctg < 8:306070/149‑1 (MQ=255) acaATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTtgctg < 5:147343/149‑1 (MQ=255) caATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTtgctgc < 8:72892/149‑1 (MQ=255) aaTGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTgctgct < 8:51496/149‑1 (MQ=255) aaTGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTgctgct > 3:393559/1‑149 (MQ=255) tGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGa < 2:62316/149‑1 (MQ=255) aCGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGcccac > 6:274611/1‑149 (MQ=255) gCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTtgc > 5:408073/1‑137 (MQ=255) gCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTtgc < 6:408073/137‑1 (MQ=255) ccAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGTGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGaa < 8:314782/149‑1 (MQ=255) ccAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGc < 1:394835/95‑1 (MQ=255) ccAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGc < 1:388959/95‑1 (MQ=255) ccAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGc > 2:394835/1‑95 (MQ=255) ccAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGc > 2:388959/1‑95 (MQ=255) ccAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGa > 2:65257/1‑148 (MQ=255) aaaCGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCCCGCGCCACTCCCACACGTTGCAGCTGACCACCGGAAAGCt > 1:110287/1‑148 (MQ=255) accGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGa < 1:61586/147‑1 (MQ=255) aaCGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGa < 5:180490/149‑1 (MQ=255) gTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAGGGTTCGGCCAGTAGGAGGACTGGGGGATCGGCGGCCAGTGCGCGCGGCACTCCCACAGGTTGCGGCTGACCCCCGGAAAGCTGATGCg > 4:95564/1‑149 (MQ=255) gTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCg > 8:328143/1‑149 (MQ=255) tGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCgg < 5:274611/149‑1 (MQ=255) gAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCgg > 2:141640/1‑148 (MQ=255) aaTGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTtg > 3:319330/1‑120 (MQ=255) aaTGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTtg < 4:319330/120‑1 (MQ=255) gTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCt > 8:342432/1‑148 (MQ=255) gTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTc < 1:141640/149‑1 (MQ=255) aTCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGc > 7:11882/1‑72 (MQ=255) aTCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGc < 8:11882/72‑1 (MQ=255) tctcTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACg > 4:242946/1‑148 (MQ=255) ctctTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGc > 1:172101/1‑148 (MQ=255) gttgCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAAttt > 1:298547/1‑149 (MQ=255) gttgCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAAtt < 5:26285/148‑1 (MQ=255) gttgCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAAtt < 3:95564/148‑1 (MQ=255) gttgCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAAt < 5:225595/147‑1 (MQ=255) ttgCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAAttt > 7:40477/1‑148 (MQ=255) ttgCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTg > 8:213201/1‑149 (MQ=255) gCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGa < 8:40477/148‑1 (MQ=255) ccAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCAAGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGa > 2:205020/2‑148 (MQ=255) cAACGCGCCGCGCGTTACCGCGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTACCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACt > 6:381890/1‑149 (MQ=255) aCGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTcc < 3:242946/149‑1 (MQ=255) gccgcgcGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCg < 4:7303/106‑1 (MQ=255) gTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAg < 2:38682/149‑1 (MQ=255) cGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCa > 3:214948/1‑149 (MQ=255) cGGGGCCAGGGCGCCAAAAGGTTCATCCATTCGTAACACTTGCGCATCGGCAGCCAGGGAACGCGCCACACCCACACGTTGCTGCTTACAACCGCAAAGGTTATGCGTAAAACGCTCACCCAAATTTGACTCCTG‑CCCAGTAGCGCCAt < 4:393559/149‑1 (MQ=255) ggggCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCAGACGTTGCTGCTGACCACCGGATAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGcctt < 6:173076/149‑3 (MQ=255) gTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTtg < 6:240805/73‑1 (MQ=255) tGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGa < 3:95/79‑1 (MQ=255) tGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGa > 4:95/1‑79 (MQ=255) gcCAAAAGCTTCATCCATTATTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGa < 8:210812/149‑1 (MQ=255) gcCAAAAGCTTCATCCATAAGGAAGACTTGCTGCTCGGCAGCCAGTGCGCGCGCCACTCCCACACGTTGCTGCTGCCGCCCGGTAAGCGGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGa > 2:152672/1‑149 (MQ=255) aaGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGa > 7:71138/1‑149 (MQ=255) | TGATCCATCAATACCAGATGTTCTGCCAGCCGTAGCGCCTCATCAATATCATGAGTGACCAGCACAATGGTACGCCCCAGCAAACGGTGAATGCGCGTCATCTCTTGTTGCAACGCGCCGCGCGTTACCGGGTCCAGTGCGCCAAAAGGTTCATCCATTAGTAAGACTTGCGGATCGGCAGCCAGTGCACGCGCCACTCCCACACGTTGCTGCTGACCACCGGAAAGCTGATGCGGATAACGCTCACGCAAATTTGACTCCAGCCCCAGTAGCGCCATTAATTCGTCGATACGA > NC_000913/2216779‑2217072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |