New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4124709	97 (1.070)	3 (0.040)	3/242	NT	3.1%	coding (2102/2199 nt)	priA	Primosome factor n' (replication factor Y)
	?	NC_000913	= 4124729	98 (1.150)					coding (2082/2199 nt)	priA	Primosome factor n' (replication factor Y)
Rejected: Frequency below/above cutoff threshold.

TGAAAAGTGTGATGAATATTGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4124559‑4124709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttgcaGCACCCTTCCCGCGTGCGCTTGCAACACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTCCCGTAAGGTGAAATGGGTGCTGGATGTTGATCCGATTGAGGGTTAAACCGCTCACGATGCGAGGCGGATCGAAAAA  <  NC_000913/4124729‑4124582                                                                                                                                                                                                                                                                                                             TGAAAAGTGTGATGAATATTGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTG                                                                                                                                                        <  8:95687/149‑1    AAAGTGTGATGAATATTGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGC                                                                                                                                                       >  5:17670/1‑147            ATGAATATTGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTG                                                                                                                                                           <  7:234264/135‑1            ATGAATATTGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTG                                                                                                                                                           >  8:234264/1‑135                                        GCATCGTGAGCGGTTTAACCCTCAATCGGATCAACTTCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAGCACCCTTCCCGCGTGCGCTTGCAACACATCATTAAC                                                                                                                 <  1:74573/149‑1                                                                 TCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAGCACCCTTCCCGCGTGCGCTTGCAACACATCA                                                                                                                      <  7:202491/119‑1                                                                 TCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAGCACCCTTCCCGCGTGCGCTTGCAACACATCA                                                                                                                      >  8:202491/1‑119                                                                                                                                                      CAGCACCCTTCCCGCGTGCGCTTGCAACACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTCCCGTAAGGTGAAATGGGTGCTGGATGTTGATCCGATTGAGGGTTAAACCGCTCACGATGCGAGGCGGATCGAAAA   <  5:27641/149‑1                                                                                                                                                      CAGCACCCTTCCCGCGTGCGCTTGCAACACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTCCCGTAAGGTGAAATGGGTGCTGGATGTTGATCCGATTGAGGGTTAAACCGCTCACGATGCGAGGCGGATCGAAA    >  3:189256/1‑148                                                                                                                                                       AGCACCCTTCCCGCGTGCGCTTGCAACACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTCCCGTAAGGTGAAATGGGTGCTGGATGTTGATCCGATTGAGGGTTAAACCGCTCACGATGCGAGGCGGATCGAAAAA  >  8:64094/1‑149                                                                                                                                                                                                                                                                                                             TGAAAAGTGTGATGAATATTGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4124559‑4124709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttgcaGCACCCTTCCCGCGTGCGCTTGCAACACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTCCCGTAAGGTGAAATGGGTGCTGGATGTTGATCCGATTGAGGGTTAAACCGCTCACGATGCGAGGCGGATCGAAAAA  <  NC_000913/4124729‑4124582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.