| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 168,350 | Δ4 bp | coding (867‑870/2244 nt) | fhuA → | ferrichrome outer membrane transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 168350 | 168353 | 4 | 20 [0] | [0] 20 | fhuA | ferrichrome outer membrane transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 168349 | 0 (0.000) | 20 (0.640) | 19/266 | 0.8 | 100% | coding (866/2244 nt) | fhuA | ferrichrome outer membrane transporter |
| ? | NC_000913 | 168354 = | 0 (0.000) | coding (871/2244 nt) | fhuA | ferrichrome outer membrane transporter | |||||
TATGCTATTGCACCGGCGTTCACCTGGCGTCCGGATGATAAAACCAATTTTACCTTCCTTTCTTACTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTG > NC_000913/168219‑168482 | gcgttatgctattgcaccggcgttcacctggcgtccggatgataaaaccaattttaccttcctttcttacttccagaacgagccggaaaccggttattacggctggttgccgaaagagggaaccgttgagccgctAACGGTAAGCGTCt < 1:87495‑M2/14‑1 (MQ=255) gttatgctattgcaccggcgttcacctggcgtccggatgataaaaccaattttaccttcctttcttacttccagaacgagccggaaaccggttattacggctggttgccgaaagagggaaccgttgagccgctAACGGTAAGCGTCTGc < 4:101738‑M2/16‑1 (MQ=255) gcgtccggatgataaaaccaattttaccttcctttcttacttccagaacgagccggaaaccggttattacggctggttgccgaaagagggaaccgttgagccgctAACGGTaa > 2:79301‑M2/106‑113 (MQ=255) ggatgataaaaccaattttaccttcctttcttacttccagaacgagccggaaaccggttattacggctggttgccgaaagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAacac > 1:119340‑M2/100‑149 (MQ=255) taaaaccaattttaccttcctttcttacttccagaacgagccggaaaccggttattacggctggttgccgaaagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGaa < 8:10076‑M2/33‑1 (MQ=255) taaaaccaattttaccttcctttcttacttccagaacgagccggaaaccggttattacggctggttgccgaaagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGaa > 7:10076‑M2/94‑126 (MQ=255) ttaccttcctttcttacttccagaacgagccggaaaccggttattacggctggttgccgaaagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATgag < 4:52740‑M2/66‑1 (MQ=255) ttcctttcttacttccagaacgagccggaaaccggttattacggctggttgccgaaagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATg > 6:1890‑M2/78‑149 (MQ=255) cttccagaacgagccggaaaccggttattacggctggttgccgaaagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATgaga < 2:134472‑M2/67‑1 (MQ=255) cttccagaacgagccggaaaccggttattacggctggttgccgaaagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATgaga > 1:134472‑M2/67‑133 (MQ=255) cagaacgagccggaaaccggttattacggctggttgccgaaagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTaa < 5:586‑M2/62‑1 (MQ=255) cagaacgagccggaaaccggttattacggctggttgccgaaagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTaa > 6:586‑M2/63‑124 (MQ=255) agaacgagccggaaaccggttattacggctggttgccgaaagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTc > 6:101021‑M2/62‑148 (MQ=255) gagccggaaaccggttattacggctggttgccgaaagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCAc < 2:119340‑M2/93‑1 (MQ=255) gccggaaaccggttattacggctggttgccggaagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACg > 4:96161‑M2/55‑148 (MQ=255) gccggaaaccggttattacggctggttgccgaaagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACg > 3:26836‑M2/55‑148 (MQ=255) cggttattacggctggttgccggaagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGa < 3:96161‑M2/104‑1 (MQ=255) ggctggttgccgaaagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACt < 5:101021‑M2/114‑1 (MQ=255) aagagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAAc > 2:35393‑M2/23‑148 (MQ=255) gagggaaccgttgagccgctAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTg < 5:1890‑M2/129‑1 (MQ=255) | TATGCTATTGCACCGGCGTTCACCTGGCGTCCGGATGATAAAACCAATTTTACCTTCCTTTCTTACTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTG > NC_000913/168219‑168482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |