| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2118649 | NA (NA) | 3 (0.100) +TCCTACGGTTCTGTGCTCGGGACC |
3/216 | 3.1 | NA | noncoding (184/186 nt) | REP144 (repetitive extragenic palindromic) element; contains 4 REP sequences | REP144 (repetitive extragenic palindromic) element; contains 4 REP sequences |
| ? | NC_000913 | = 4285379 | NA (NA) | intergenic (‑166/+34) | yjcH/acs | DUF485 family inner membrane protein/acetyl‑CoA synthetase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
AAGACCCGAGCACAGAACCGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGGCGCGACAGCACAATCATCACCACAAACGCC > NC_000913/2118502‑2118785 | aaGACCCGAGCACAGAACCGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCgg > 6:125824/1‑149 (MQ=255) cccGAGCACAGAACCGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAAc < 4:45213/149‑1 (MQ=255) ccGAGCACAGAACCGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAAcc > 2:53110/1‑149 (MQ=255) cacaGAACCGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGt < 4:50142/149‑1 (MQ=255) tAAGGCGTTCACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAAc < 1:53110/149‑1 (MQ=255) gTTCACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCAccc > 8:134355/1‑149 (MQ=255) ttCACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCAcccc > 6:134674/1‑149 (MQ=255) gccgcATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATGCGGCGTAAAACGCCTTATCCgtc > 8:91331/1‑107 (MQ=17) gccgcATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATGCGGCGTAAAACGCCTTATCCgtc < 7:91331/109‑3 (MQ=17) gccgcATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCg > 8:112918/1‑114 (MQ=255) gccgcATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCg < 7:112918/114‑1 (MQ=255) gccgcATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTc > 8:42470/1‑119 (MQ=255) gccgcATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTc < 7:42470/119‑1 (MQ=255) aTCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTaaaa < 5:134674/149‑1 (MQ=255) ccGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAg > 2:139492/1‑148 (MQ=255) tCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGcattttca > 3:55749/1‑149 (MQ=255) ccTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAg < 1:156479/113‑1 (MQ=255) ccTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAg > 2:156479/1‑113 (MQ=255) aTGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGc < 5:125824/148‑1 (MQ=255) gACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTaaaa < 8:1879/120‑1 (MQ=255) gACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTaaaa > 7:1879/1‑120 (MQ=255) gACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAAc > 5:147015/1‑149 (MQ=255) gcgTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGa > 1:96652/1‑149 (MQ=255) gTCTTCTCAGGCCGACAGGTCCCGAGCACAGACCCGTAGGACGGATAAGGCGGTTTACGCCGCATCAGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTc < 3:20560/131‑1 (MQ=39) gTCTTATCAGGCCTACAGGTCCCGCGCACAGACCCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGACAACAGCAACTCACCCCGCCCGGAAAAGCATGTTCAtttttgc > 4:20560/1‑129 (MQ=37) gTCTTATCAGGCCTACAGGTCCCGAGCACAGACCCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGCAAACAGCACCTCACCCCGCCCGTAACAGCATTTTCATTTTTTc > 4:18593/1‑131 (MQ=255) gTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTc < 3:18593/131‑1 (MQ=255) cTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACaaaa > 6:152044/1‑141 (MQ=255) cTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACaaaa < 5:152044/141‑1 (MQ=255) aTCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCa > 7:55395/1‑149 (MQ=255) tCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGcattttc > 7:33709/1‑117 (MQ=255) tCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGcattttc < 8:33709/117‑1 (MQ=255) aGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACtt > 8:3724/1‑149 (MQ=255) aGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACt < 1:137350/148‑1 (MQ=255) ggCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAg < 6:61181/85‑1 (MQ=255) ggCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTc > 7:41371/1‑149 (MQ=255) cTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACcccgc > 8:22619/1‑95 (MQ=255) cTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACcccgc < 7:22619/95‑1 (MQ=255) tACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTccacc > 5:81397/1‑149 (MQ=255) ccGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAAc > 4:742/1‑71 (MQ=255) ccGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAAc < 3:742/71‑1 (MQ=255) ccGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCg < 2:96652/148‑1 (MQ=255) gAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTaa > 6:32601/1‑90 (MQ=255) gCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATgg > 2:51061/1‑149 (MQ=255) acaGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGgcg < 8:55395/149‑1 (MQ=255) caGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGgcgc < 1:139492/149‑1 (MQ=255) caGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGgcgc > 4:33565/1‑149 (MQ=255) aGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGgcgc > 1:15597/1‑148 (MQ=255) tAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGGCGCGACAGca > 8:144842/1‑148 (MQ=255) ggACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGGCGCGACAGCACaa > 4:82927/1‑149 (MQ=255) ggATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGGCGCGACAGCACAatcat > 8:35112/1‑149 (MQ=255) aTAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGGCGCGACAGCACaa > 6:65028/1‑143 (MQ=255) aTAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGGCGCGACAGCACaa < 5:65028/143‑1 (MQ=255) aTAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGGCGCGACAGCACAAtcatca > 2:37151/1‑149 (MQ=255) tAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGTACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCAGCACCAGCGGATGGCGCGACAGCACAATCATcac < 6:147015/149‑1 (MQ=255) tAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGGCGCGACAGCACAATCATcac < 3:33565/149‑1 (MQ=255) ggCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTc < 2:173018/105‑1 (MQ=255) ggCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTc > 1:173018/1‑105 (MQ=255) ggCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGGCGCGACAGCACAATCATcaccac < 6:81397/149‑1 (MQ=255) ttttACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACACACCCCGCCCGTAAAAGCAATTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGGCGCGACAGCACAATCATCACCACAAAc < 7:134355/149‑1 (MQ=255) aCGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGGCGCGACAGCACAATCATCACCACAAACGcc < 7:3724/148‑1 (MQ=255) | AAGACCCGAGCACAGAACCGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCGACAAAACTGACGCTTCACTTCCACCACCAGCGGATGGCGCGACAGCACAATCATCACCACAAACGCC > NC_000913/2118502‑2118785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |