| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 168,474 | C→T | Q331* (CAG→TAG) | fhuA → | ferrichrome outer membrane transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 168,474 | 0 | C | T | 98.1% | 351.5 / ‑2.3 | 103 | Q331* (CAG→TAG) | fhuA | ferrichrome outer membrane transporter |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (51/50); total (52/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.27e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
AGAGGGAACCGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGT > NC_000913/168329‑168619 | agagGGAACCGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAg > 8:143978/1‑148 (MQ=255) gagGGAACCGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGaa < 3:96425/149‑1 (MQ=255) agGGAACCGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAAc < 8:353004/149‑1 (MQ=255) agGGAACCGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAAc > 7:9277/1‑149 (MQ=255) ccGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTg > 4:144825/1‑148 (MQ=255) cTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGa < 7:296390/146‑1 (MQ=255) cTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGa > 8:296390/1‑146 (MQ=255) tGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTgcgc < 4:56486/137‑1 (MQ=255) ccGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGaaaaca > 4:329279/1‑148 (MQ=255) gAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGaaaacaaaa < 2:148229/149‑1 (MQ=255) aCGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAAcc < 3:254338/149‑1 (MQ=255) ggTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTc < 5:240115/149‑1 (MQ=255) gCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGc < 1:329116/146‑1 (MQ=255) gCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGc > 2:329116/1‑146 (MQ=255) tGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGc > 8:321687/1‑149 (MQ=255) ccGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGt < 2:275847/149‑1 (MQ=255) cGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGtt > 2:16908/1‑149 (MQ=255) cGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGtt < 2:7490/149‑1 (MQ=255) aCAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTa < 7:354495/149‑1 (MQ=255) aCAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTa < 5:217945/149‑1 (MQ=255) aCAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTa > 4:189511/1‑149 (MQ=255) aGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATg < 3:329279/149‑1 (MQ=255) aGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGGGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATg < 6:62655/149‑1 (MQ=255) cTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTAGTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGtt < 1:243844/149‑1 (MQ=255) tAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTa < 5:10547/147‑1 (MQ=255) aaTGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTATATGGTTACgg > 1:391685/1‑149 (MQ=255) aTGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTAt < 6:88872/140‑1 (MQ=255) aTGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTAt > 5:88872/1‑140 (MQ=255) aaGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGt < 6:34102/148‑1 (MQ=255) aaGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTc < 3:144825/149‑1 (MQ=255) aaGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTc < 7:187411/149‑1 (MQ=255) ggCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGAGCACGAAATTAACGACACCTATAATCTGCCTTAGAACCTGCGCTTTGCTTAAAACAAAACCTCTCAAAACAGCGAATATGGTTACTGCGtcttct > 5:227637/1‑149 (MQ=255) gCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTc < 4:327730/149‑1 (MQ=255) gCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTc < 1:79559/149‑1 (MQ=255) gCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTc > 4:113137/1‑149 (MQ=255) gCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCGTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTc < 7:389311/149‑1 (MQ=255) gaaCCACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATc < 6:176825/149‑1 (MQ=255) gaccatcttCTCATTACGAGCAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACCCCATTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAACCCTCGCAAAGCAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGc > 3:177468/8‑148 (MQ=255) cacCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTcc > 1:327083/1‑139 (MQ=255) cacCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTcc < 2:327083/139‑1 (MQ=255) acCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGaa < 3:24090/149‑1 (MQ=255) acCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGaa > 6:91442/1‑149 (MQ=255) cTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATg > 7:404456/1‑149 (MQ=255) cTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATg < 3:174946/149‑1 (MQ=255) cTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGATGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATg > 5:268279/1‑149 (MQ=255) ttCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCt > 1:274388/1‑148 (MQ=255) ctcGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTa < 8:216477/148‑1 (MQ=255) tcGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTa > 7:372489/1‑147 (MQ=255) tcGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTa > 8:49774/1‑147 (MQ=255) gTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGc < 5:248367/136‑1 (MQ=255) gTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACa < 8:404456/147‑1 (MQ=255) gTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACAACTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTAc < 6:28266/146‑1 (MQ=255) tAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGc > 8:320646/1‑148 (MQ=255) aaTGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCa > 5:201895/1‑148 (MQ=255) agaagaTGGTCGGCTACAGCTTCGATCACGAATTTAACGCCACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAg > 2:311024/1‑149 (MQ=255) agaagaTGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAg > 2:354599/1‑149 (MQ=255) gaagaTGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAgt < 1:16908/149‑1 (MQ=255) agaTGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAgtgt < 7:320646/149‑1 (MQ=255) gaTGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGtgtg > 8:164225/1‑149 (MQ=255) aTGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCTCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑c > 3:130739/1‑149 (MQ=255) aTGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑c < 7:164225/149‑1 (MQ=255) ggTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑Cgg > 5:181248/1‑149 (MQ=255) gTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑Cgg > 3:90672/1‑148 (MQ=255) gCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTa < 8:9277/149‑1 (MQ=255) cTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAg > 5:166994/1‑149 (MQ=255) tACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTc < 3:40358/74‑1 (MQ=255) tACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTc > 4:40358/1‑74 (MQ=255) cAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTATATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAgc < 2:391685/147‑1 (MQ=255) cTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAAc < 3:83896/128‑1 (MQ=255) cTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAAc > 4:83896/1‑128 (MQ=255) cTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAg > 1:48932/1‑149 (MQ=255) cTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAg > 3:80447/1‑149 (MQ=255) gATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGc > 8:256276/1‑134 (MQ=255) gATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGc < 7:256276/134‑1 (MQ=255) aTCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGAt < 6:181248/149‑1 (MQ=255) aTCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTATGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGa > 2:133179/1‑148 (MQ=255) aTCACGAATTTAACGACACCTTTACTGAGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTCGCGCCAGCGGa > 8:362774/1‑148 (MQ=255) cACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTAc > 4:31770/1‑114 (MQ=255) cACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTAc < 3:31770/114‑1 (MQ=255) aCGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATa > 6:386039/1‑147 (MQ=255) cGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTA‑AACAAACCATTTGCCGGCTTTGCCGCAAGCGGATAAAg > 1:105510/1‑149 (MQ=255) aaTTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGc < 4:80447/149‑1 (MQ=255) aTTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGcc < 3:113137/149‑1 (MQ=255) tttAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCa < 7:49774/149‑1 (MQ=255) gACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCATTATCt < 7:321687/149‑1 (MQ=255) cTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTa > 4:385407/1‑60 (MQ=255) cTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTa < 3:385407/60‑1 (MQ=255) cTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCACACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCAGTATCTGGCAc > 2:345133/1‑149 (MQ=255) cTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCAc > 6:129237/1‑149 (MQ=255) cTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCACCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCAc > 7:32214/1‑149 (MQ=255) tttACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCATTATCt < 5:111286/143‑1 (MQ=255) tttACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCATTATCt > 6:111286/1‑143 (MQ=255) tttACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACg > 1:258695/1‑149 (MQ=255) tgtgCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTaaa > 3:162479/1‑148 (MQ=255) tgtgCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTaaa > 7:59536/1‑148 (MQ=255) tgtgCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTaaa > 7:51070/1‑148 (MQ=255) tgtgCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTaaa > 1:42316/1‑148 (MQ=255) tgCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAAt < 4:162479/147‑1 (MQ=255) cGTTAGAACCTGCGCTTTGCTTTAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATAcg < 4:130739/148‑1 (MQ=255) cGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATAcgt < 5:386039/149‑1 (MQ=255) | AGAGGGAACCGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTG‑CGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGT > NC_000913/168329‑168619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |