| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,413,482 | IS5 (–) +4 bp | coding (13‑16/1203 nt) | ackA → | acetate kinase A and propionate kinase 2 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 35 (0.960) | 29/260 | 0.4 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2413485 | 0 (0.000) | coding (16/1203 nt) | ackA | acetate kinase A and propionate kinase 2 | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 31 (0.850) | 26/260 | 0.6 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2413482 = | 0 (0.000) | coding (13/1203 nt) | ackA | acetate kinase A and propionate kinase 2 | |||||
AGATATTTCTTCCATCATGCAAAAAAAATTTGCAGTGCATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCTGCCCGAAGCACGTATCAAATGGAAAATGGAC > NC_000913/2413340‑2413616 | aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAc > 2:17734‑M2/143‑149 (MQ=255) agaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACt > 1:12190‑M2/142‑149 (MQ=255) atatTTCTTCCATCATGCAAAAAAAATTTGCAGTGCATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaag < 2:135474‑M2/149‑6 (MQ=255) aaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTa < 2:155125‑M2/6‑1 (MQ=255) aaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTa > 1:155125‑M2/140‑145 (MQ=255) tcttcCATCATGCAAAAAAAATTTGCAGTGCATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgc < 1:85586‑M2/148‑10 (MQ=255) ctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCt > 1:160324‑M2/135‑148 (MQ=255) gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTgg > 7:3827‑M2/125‑134 (MQ=255) gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGt < 8:104359‑M2/24‑1 (MQ=255) aaaaaaaaTTTGCAGTGCATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcgggga < 1:183720‑M2/148‑23 (MQ=255) aaaaaTTTGCAGTGCATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaatt > 4:55447‑M2/1‑123 (MQ=255) gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACt < 2:160324‑M2/35‑1 (MQ=255) ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTg > 7:60957‑M2/107‑149 (MQ=255) ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTg > 2:78995‑M2/107‑149 (MQ=255) cATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgact > 3:45214‑M2/1‑109 (MQ=255) cATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgact > 3:47363‑M2/1‑109 (MQ=255) tAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt < 3:126707‑M2/149‑49 (MQ=255) aaTCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt < 6:128403‑M2/149‑50 (MQ=255) aaTGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc > 5:128403‑M2/1‑93 (MQ=255) tCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaatatgcggggatattcttctcggctgactcagtcatttcatttcttcat > 2:85586‑M2/1‑89 (MQ=255) agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGt > 4:57192‑M2/83‑148 (MQ=255) tgtCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagc < 2:165584‑M2/102‑18 (MQ=255) gtCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgc < 2:171293‑M2/93‑10 (MQ=255) gtCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgc > 1:171293‑M2/1‑84 (MQ=255) atGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga < 6:150235‑M2/149‑72 (MQ=255) cGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgctaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct > 6:70026‑M2/1‑70 (MQ=255) gCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc > 2:183720‑M2/1‑69 (MQ=255) ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTa < 3:57192‑M2/87‑1 (MQ=255) tATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc > 1:135474‑M2/1‑65 (MQ=255) tATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttcacggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc > 4:59343‑M2/1‑65 (MQ=255) cctgttctattgctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGc > 3:39077‑M2/62‑105 (MQ=255) cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGc < 4:39077‑M2/44‑1 (MQ=255) ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCa < 2:71548‑M2/33‑1 (MQ=255) tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGaa < 2:136271‑M2/93‑1 (MQ=255) tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGaa > 1:136271‑M2/55‑147 (MQ=255) tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGtt < 8:60957‑M2/97‑1 (MQ=255) gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTc < 1:78995‑M2/99‑1 (MQ=255) ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTc > 4:46575‑M2/50‑148 (MQ=255) cGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt < 1:120698‑M2/127‑76 (MQ=255) cGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt > 2:120698‑M2/1‑52 (MQ=255) gTTTTTTTAGCCACGTATCAATTATAGGTACTTCAATGTCGAGTAAGATAGggaaggtgcgaataagcgttgaaattcttctcg < 2:99490‑M2/84‑34 (MQ=255) gTTTTTTTAGCCAAGTAGCAATTATAGGTAGTTCCATGTCGATTAAGTTATggaaggtgcgaataagcggggaaattcttctcg > 1:99490‑M2/1‑51 (MQ=255) agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCt > 4:38162‑M2/46‑149 (MQ=255) cACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttag > 4:126707‑M2/1‑40 (MQ=255) aCGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttaga < 5:4536‑M2/149‑111 (MQ=255) atgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCTGCCCGAAGCAc < 3:46575‑M2/115‑1 (MQ=255) atctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCTGCCCGAAGCACGTa > 5:64183‑M2/32‑149 (MQ=255) aTCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct > 8:57956‑M2/1‑35 (MQ=255) aTCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct < 7:57956‑M2/127‑93 (MQ=255) aTCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat > 6:51080‑M2/1‑35 (MQ=255) aTCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat < 5:51080‑M2/123‑89 (MQ=255) aTCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt > 6:136168‑M2/1‑35 (MQ=255) aTCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt < 5:136168‑M2/92‑58 (MQ=255) tcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTACCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCTGCCCGAAGCACGTATc > 5:94607‑M2/29‑148 (MQ=255) aTTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttct < 4:130303‑M2/149‑119 (MQ=255) ttATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt > 3:130303‑M2/1‑30 (MQ=255) agggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCTGCCCGAAGCACGTATCaaatgga < 3:38162‑M2/127‑1 (MQ=255) ttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAAt < 2:141230‑M2/94‑1 (MQ=255) ttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAAt > 1:141230‑M2/16‑109 (MQ=255) ccATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaatacttctcggctgactaagtcatttcaattcttcatgtttgagcccattttttctcccgtaaatgccatgaataagcctatttagcccgtatcttcgacatttaagg < 8:7731‑M2/149‑132 (MQ=255) cgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAAttt > 2:191173‑M2/11‑52 (MQ=255) cgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAAttt < 1:191173‑M2/42‑1 (MQ=255) gcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTgg > 2:18650‑M2/10‑92 (MQ=255) gcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTgg < 1:18650‑M2/83‑1 (MQ=255) gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccacttaag > 4:29185‑M2/1‑5 (MQ=255) gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccacttaag < 3:29185‑M2/135‑131 (MQ=255) ttAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATg > 4:118823/1‑55 (MQ=255) ttAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATg < 3:118823/55‑1 (MQ=255) | AGATATTTCTTCCATCATGCAAAAAAAATTTGCAGTGCATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCTGCCCGAAGCACGTATCAAATGGAAAATGGAC > NC_000913/2413340‑2413616 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |