Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
7 2 3
8 2 3
9 2 3
10 2 3
11 2 3
12 2 3
7 13 19

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 59 103
Multiple Base Substitutions 0 0
Deletions 7 88
Insertions 6 44
Mobile Element Insertions 2 3
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 74 238

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 6 0 44.5 1657664 97.7% 1619537 128.7
A7 F14 I1 R1 8 0 66.7 2467724 97.6% 2408498 129.3
A7 F109 I0 R1 57 0 62.0 2337736 97.7% 2283968 128.8
A7 F109 I3 R1 10 0 81.7 3094676 97.4% 3014214 128.8
A8 F14 I1 R1 7 0 58.2 2177604 97.3% 2118808 128.3
A8 F108 I0 R1 71 0 63.8 2405924 97.6% 2348181 128.9
A8 F108 I3 R1 7 0 73.3 2847404 97.6% 2779066 129.2
A9 F14 I1 R1 8 0 54.8 2042578 97.6% 1993556 128.5
A9 F106 I0 R1 69 0 54.9 2068438 97.3% 2012590 129.2
A9 F106 I2 R1 8 0 79.9 3030504 97.5% 2954741 128.5
A10 F14 I1 R1 8 0 72.1 2708724 97.4% 2638297 128.7
A10 F110 I0 R1 67 0 51.4 1920196 97.6% 1874111 128.5
A10 F110 I5 R1 8 0 50.2 1877068 97.6% 1832018 128.7
A11 F14 I1 R1 6 0 63.5 2360370 97.7% 2306081 128.7
A11 F109 I0 R1 66 0 61.9 2335078 97.4% 2274365 128.1
A11 F109 I3 R1 9 0 58.9 2192128 97.6% 2139516 128.7
A12 F14 I1 R1 6 0 70.9 2644348 97.6% 2580883 128.4
A12 F106 I0 R1 61 0 51.6 1980998 97.6% 1933454 128.7
A12 F106 I2 R1 7 0 61.7 2360354 97.3% 2296624 128.1

Mutation Needle Plot


Mutation Targets

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