ALEdb 1.1.0
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Genetic Target:
Frequency Cut:
min
max
Ref Sequence:
1
2
3
4
5
ACB122
ACB143
AC_000091
ADP1-WT
AE004091
AE005672
AE015451
AE015451_phaM1
AE016853
AECK01000001
AECK01000002
AECK01000003
AECK01000004
AECK01000005
AECK01000006
AECK01000007
AL009126
AM260479
AM260480
AM406671
AP009048
AP009048_minE
AP009048_minEaldA
AP012306
ATCC_17978_1
AY305378
Annotation_U21_Trimmed_contig_1
Annotation_U21_Trimmed_contig_10
Annotation_U21_Trimmed_contig_11
Annotation_U21_Trimmed_contig_3
Annotation_U21_Trimmed_contig_4
Annotation_U21_Trimmed_contig_8
Annotation_U21_Trimmed_contig_9
AssemblyC74_contig_1
AssemblyC74_contig_12
AssemblyC74_contig_15
AssemblyC74_contig_2
AssemblyC74_contig_22
AssemblyC74_contig_27
AssemblyC74_contig_28
AssemblyC74_contig_3
AssemblyC74_contig_31
AssemblyC74_contig_32
AssemblyC74_contig_33
AssemblyC74_contig_37
AssemblyC74_contig_38
AssemblyC74_contig_39
AssemblyC74_contig_41
AssemblyC74_contig_42
AssemblyC74_contig_43
AssemblyC74_contig_44
AssemblyC74_contig_47
AssemblyC74_contig_49
AssemblyC74_contig_5
AssemblyC74_contig_57
AssemblyC74_contig_8
BA000036
BK006934
BK006935
BK006936
BK006937
BK006938
BK006939
BK006940
BK006941
BK006942
BK006943
BK006944
BK006945
BK006946
BK006947
BK006948
BK006949
BN000925
BS168_reference_genome
BX571857
BX571858
CHCC_Strain_A_locus_tag
CHCC_Strain_B_locus_tag
CM002300
CM002301
CM002302
CM002303
CM002304
CM002305
CM002306
CP000568
CP000730
CP000730_gene_names_07072017
CP000731
CP001510
CP002094
CP005959
CP006584
CP006881
CP009272
CP009273
CP009974
CP009977
CP009978
CP011495
CP011496
CP012712
CP016816
CP025533
CP042583
CP043523
CP059991
C_pacbio
D592
D592_hybrid_assembly
DH5a_de_novo
Exported
FN392319
FN392320
FN392321
FN392322
HMP3071
J1074contig2_2
JAHLVT010000001
JAHLVT010000002
JAHLVT010000003
JAHLVT010000004
JAHLVT010000005
JAHLVT010000006
JAHLVT010000007
JAHLVT010000008
JAHLVT010000009
JAHLVT010000010
JAHLVT010000011
JAHLVT010000012
JAHLVT010000013
JAHLVT010000014
JAHLVT010000015
JAHLVT010000016
JAHLVT010000017
JAHLVT010000018
JAHLVT010000019
JAHLVT010000020
JAHLVT010000021
JAHLVT010000022
JAHLVT010000023
JAHLVT010000024
JAHLVT010000025
JAHLVT010000026
JAHLVT010000027
JAHLVT010000028
JAHLVT010000029
JAHLVT010000030
JAHLVT010000031
JAHLVT010000032
JAHLVT010000033
JAHLVT010000034
JAHLVT010000035
JAHLVT010000036
JAHLVT010000037
JAHLVT010000039
JAHLVT010000040
JAHLVT010000041
JAHLVT010000042
JAHLVT010000043
JAHLVT010000044
JAHLVT010000045
JAHLVT010000046
JAHLVT010000047
JAHLVT010000049
JAHLVT010000050
JAHLVT010000051
JAHLVT010000052
JAHLVT010000053
JAHLVT010000056
JAHLVT010000057
JAHLVT010000058
JAHLVT010000059
JAHLVT010000061
JE3692-4
KCTC5387_Genome
KCTC5387_pCTK01
KT2440
LAC_H_1
LCTV02000001
LCTV02000002
LCTV02000003
LCTV02000004
LCTV02000005
LCTV02000006
LCTV02000007
LCTV02000008
LCTV02000009
LCTV02000010
LCTV02000011
LCTV02000012
LCTV02000013
LCTV02000014
LCTV02000015
LCTV02000016
LCTV02000017
LCTV02000018
LCTV02000019
LCTV02000020
LCTV02000021
LCTV02000022
LCTV02000023
LCTV02000024
LCTV02000025
LCTV02000026
LCTV02000027
LCTV02000028
LCTV02000030
LT962476
LT962477
LT962478
LT962479
MVJG01000001
MVJG010000013
MVJG01000002
MVJG010000022
MVJG01000003
MVJG010000030
MVJG010000036
MVJG01000004
MVJG01000005
MVJG01000006
MVJG01000007
MVJG01000008
MVJG01000009
MVJG01000010
MVJG01000011
MVJG01000012
MVJG01000014
MVJG01000015
MVJG01000016
MVJG01000017
MVJG01000018
MVJG01000019
MVJG01000020
MVJG01000021
MVJG01000023
MVJG01000024
MVJG01000025
MVJG01000026
MVJG01000027
MVJG01000028
MVJG01000029
MVJG01000031
MVJG01000032
MVJG01000033
MVJG01000034
MVJG01000035
MVJG01000037
MVJG01000038
MVJG01000039
MVJG01000040
MVJG01000041
MVJG01000042
MVJG01000043
MVJG01000044
MVJG01000048
MVJG01000051
MVJG01000052
MVJG01000055
MVJG01000057
MVJG01000059
MVJG01000060
MVJG01000062
MVJG01000063
MVJG01000064
MVJG01000066
MVJG01000067
MVJG01000069
MVJG01000070
MVJG01000071
MVJG01000072
MVJG01000073
MVJG01000074
MVJG01000075
MVJG01000077
MVJG01000078
MVJG01000079
MVJG01000080
MVJG01000081
MVJG01000082
MVJG01000083
MVJG01000084
MVJG01000085
MVJG01000086
MVJG01000087
MVJG01000088
MVJG01000089
MVJG01000090
MVJG01000091
MVJG01000092
MVJG01000093
MVJG01000094
MVJG01000095
MVJG01000096
MVJG01000097
MVJG01000098
MVJG01000099
MVJG01000100
MVJG01000101
MVJG01000102
MVJG01000103
MVJG01000104
MVJG01000105
MVJG01000106
MVJG01000107
MVJG01000108
MVJG01000109
MVJG01000110
MVJG01000111
MVJG01000112
MVJG01000115
MVJG01000117
MVJG01000120
MVJG01000121
MW240712
MaACR
NBC_01270_1
NC_000521
NC_000913
NC_000913-UCSD-MG1655
NC_000913_3_KO_pgi
NC_000913_3_bme_pgi
NC_000913_3_hsa_pgi
NC_000913_3_hsa_tpiA
NC_000913_3_pae_pgi
NC_000913_3_pae_tpiA
NC_000913_3_vch_pgi
NC_000913_3_vch_tpiA
NC_000913_BOP27
NC_000913_glpK
NC_000913_yihS
NC_000964
NC_002745
NC_002947
NC_002947_3_PKint
NC_002947_CJ-RC
NC_004318
NC_004325
NC_004326
NC_004327
NC_004328
NC_004329
NC_004330
NC_004331
NC_007779
NC_007779_W3110_cfb
NC_007779_cfb
NC_008463
NC_009004
NC_009655
NC_010468
NC_010468_Crooks_cfb
NC_010468_cfb
NC_012417
NC_012967
NC_012971
NC_012971_BL21_cfb
NC_012971_cfb
NC_017304
NC_017625_1_gene_names_locus_mapping
NC_017635
NC_017664
NC_021214
NC_037280
NC_037281
NC_037282
NC_037283
NC_037284
NZ_CP009273
NZ_CP015031
NZ_CP022686
NZ_CP025268
NZ_CP029371
NZ_CP034943
NZ_CP039287
NZ_CP039288
NZ_CP039289
NZ_CP058219
NZ_LN832404
NZ_MW240712
NZ_WBMH01000001
NZ_WBMH01000006
NZ_WBMH01000009
NZ_WBMH01000014
NZ_WBMH01000034
NZ_WBMH01000038
NZ_WBMH01000050
NZ_WBMH01000070
NZ_WBMH01000076
NZ_WBMH01000078
NZ_WBMH01000117
NZ_WBMH01000119
NZ_WBMH01000122
NZ_WBMH01000151
NZ_WBMH01000167
NZ_WBMH01000196
NZ_WBMH01000205
NZ_WBMH01000214
PJ23107-YhjV
P_putida_SC2_tnGlf_tnGB1_18_05_18
P_putida_SC_2_tnGlf_tnGB1_tnGB2_28
REL606
SDT396_new
SER9
SER9_trpR_atten_T7
SER9_trpR_atten_T7_ser_pathway_pSER5
TCH1516
TrimmedAssembly_T66_contig_1
TrimmedAssembly_T66_contig_21
TrimmedAssembly_T66_contig_23
TrimmedAssembly_T66_contig_28
TrimmedAssembly_T66_contig_3
TrimmedAssembly_T66_contig_30
TrimmedAssembly_T66_contig_32
TrimmedAssembly_T66_contig_4
TrimmedAssembly_T66_contig_41
TrimmedAssembly_T66_contig_8
TrimmedAssembly_T66_contig_9
U00096
USA300TCH1516_ALE
USA300_Hybrid_03232018
USA300_LAC_03232018
W3110S.gb
aeruginosaPAO1
c_pvp_gene
chr1
chr10
chr11
chr12
chr13
chr14
chr15
chr16
chr2
chr3
chr4
chr5
chr6
chr7
chr8
chr9
contig_1
contig_100
contig_101
contig_102
contig_103
contig_106
contig_107
contig_108
contig_109
contig_11
contig_110
contig_111
contig_112
contig_113
contig_114
contig_116
contig_117
contig_118
contig_119
contig_120
contig_121
contig_122
contig_123
contig_124
contig_125
contig_126
contig_127
contig_128
contig_129
contig_13
contig_130
contig_131
contig_132
contig_133
contig_134
contig_135
contig_136
contig_137
contig_138
contig_139
contig_14
contig_140
contig_142
contig_143
contig_144
contig_145
contig_146
contig_147
contig_148
contig_149
contig_15
contig_151
contig_152
contig_153
contig_154
contig_155
contig_156
contig_157
contig_158
contig_159
contig_161
contig_162
contig_163
contig_164
contig_165
contig_21
contig_23
contig_29
contig_3
contig_37
contig_4
contig_41
contig_42
contig_6
contig_61
contig_69
contig_73
contig_74
contig_75
contig_76
contig_77
contig_79
contig_80
contig_81
contig_82
contig_83
contig_84
contig_85
contig_86
contig_87
contig_88
contig_89
contig_9
contig_90
contig_91
contig_92
contig_93
contig_94
contig_95
contig_96
contig_97
contig_98
dh5a
minE
mit
pACYC_eMutaT7
pHH-29_RBS
pHM11
pHM11a
pHM345
pHM574
pL3432
pLS1904
pMT28
pMTP18
pMTP23
pMTP7
pMUT1-hok-empty
pMut-Ompa-D5-IL2wt-His6
pMut-Ompa-D5-IL2wt-His6_IL2
pS4413_qbsFGH
pS4413_qbsFH
pSD158
pSD87
pSIJ663_pHT315_araE_xy
seFadBA
tdTER
Position:
Start
End
Mutation Type:
AMP
CON
DEL
INS
INV
MOB
SNP
SUB
Project:
42C
AUX2
C13
CCK
Epistasis
GLU
GLY
GYD
ILT
LTEE
PGI
SER
SNFM
SNFR
SSW
SvNS
SYN
TEE
Thermotoga
E. coli chemical tolerance
Enzyme Promiscuity Novel Substrates PALE ALE
42C_Tenaillon
Genome-Reduced Ecoli
isobutanol-resistant Ecoli
minE coli Evolution
Pputida_IL_TALE
minE Evolution
Pputida_TALE_ethylene_glycol
W3110 Benzoate Tolerization
P. putida Hydroxycinnamic TALE
Pyocyanin Resistance TALE
Isopropanol tolerance of Escherichia coli
E.coli Acetate
E.coli Ethanol Stress
Ford_etal_2016_NatComm
W3110 Acid Tolerization
Pputida_carbon_ALE_2
OxidizeME
OxyR
C321
CCK2
gRALE_MG1655
Ecoli_gallium_resistance
Ecoli_ethylene_glycol_adaption
Ecoli_resistance_ChlDoxTri
Ecoli_resistance_caz
Ecoli_resistance_tet_intragenCoevol
Ecoli_resistance_norfloxacin
Ecoli_Isoprenol_TALE
Ecoli_rangeExp
Ecoli_biomass_CO2
Bsubtilis_Hydrolysate
Ecoli_SugarSynth_CO2
Pputida_carbon_ALE
Ecoli_antibResist_metabol
MMV
Ecoli_sexualRecomb_glycerol
TF_KALE
BS6633_HSTALE
2017_PNAS_Ecoli_CCR_ALE
Unconstrained Evolution
EEP
ROS
Baym_M_2016
Swings_T_2017
Morgan_M_2022
Philipp_Keller_2022
Takaaki_Horinouchi_2017
Kento_Tokuyama_2018
JUSTIN_R_MEYER_2012
Kangsan_Kim_2022
David_C_Marciano_2022
Nissle_ALE_sim public
Feng_Dong_2021
Hadiastri_2021
Akamu_J_Ewunkem_2021
Sada_M_2022
Adipic_Acid_and_1_4_Butanediol
Robin_Dorau_2021
Jaya_Gupta_2020
Yue_Liu_2021
Carina_Prell_2021
Tatjana_Walter_2020
Baowei_Wang_2020
Guido_Hennig_2020
Frederic_Chen_2020
Heiko_Babel_2020
Calum_Pattrick_2019
Pauline_Bleichert_2020
Vishwa_Patel_2021
Bram_Bergh_2016
Reka_Spohn_2019
Pablo_Laborda_2022
Horinouchi_T_2017
Liuyan_Gu_2023
Eleftheria_P_2023
YeEun_Kim_2022
Christopher_2022
Putida_Vanillate
Byeong_Jang_2021
Elizabeth_Perry_2015
Wonjae_Seong_2020
Pputida_dynamic_ALE
Strain Tax ID:
N/A
1110693
1116234
1215087
1219067
1234
1280
1310161
1335916
1352
1415167
1415168
1415169
1415170
1415171
1415172
1426
158879
1590
160488
160489
160490
160491
160492
160493
160494
160495
160496
160497
160498
160504
160511
160512
160513
160514
160515
160518
160522
160524
160525
160550
160551
160552
160561
160565
160570
160571
160572
160581
160582
160585
160589
160590
160591
160592
1718
1806462
196627
203119
208963
208964
223283
224308
224309
224310
224311
243274
272630
278197
282459
285498
316407
316435
36329
381666
400667
413779
413997
416870
44688
451516
457425
469008
481805
498388
511145
511146
5286
536056
54571
566546
62977
637887
6666666
679895
691
703612
746361
867914
889517
NCBI:txid511145
