mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 10,637 | C→A | G18G (GGC→GGA) | mogA → | molybdenum cofactor biosynthesis protein MogA |
| RA | 194,161 | A→G | M42V (ATG→GTG) | LY180_00835 → | 1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase |
| RA | 230,529 | T→C | D275G (GAC→GGC) | LY180_01015 ← | LysR family transcripitonal regulator |
| RA | 459,705 | Δ1 bp | coding (137/276 nt) | LY180_02175 ← | transcriptional regulator |
| RA | 793,877 | T→C | C358R (TGT→CGT) | LY180_03720 → | rhsA |
| RA | 793,936 | T→C | S377S (AGT→AGC) | LY180_03720 → | rhsA |
| RA | 793,954 | A→G | E383E (GAA→GAG) | LY180_03720 → | rhsA |
| RA | 793,985 | A→G | N394D (AAC→GAC) | LY180_03720 → | rhsA |
| RA | 814,037 | G→C | T139S (ACC→AGC) | gltA ← | type II citrate synthase |
| MC JC | 1,011,041 | Δ300 bp | intergenic (+21/+62) | LY180_04735 → / ← pflA | hypothetical protein/pyruvate formate lyase‑activating protein |
| MC JC | 1,088,034 | Δ103 bp | intergenic (+278/+242) | helD → / ← LY180_05060 | DNA helicase IV/hypothetical protein |
| RA | 1,168,401 | C→A | S606* (TCG→TAG) | LY180_05445 → | glucosyltransferase |
| MC JC | 1,213,485 | Δ7 bp | intergenic (+184/‑105) | LY180_05705 → / → LY180_05710 | DNAse/PTS glucose transporter subunit IIBC |
| RA | 1,324,434 | A→C | K833T (AAA→ACA) | narZ → | nitrate reductase A subunit alpha |
| RA | 1,335,968 | A→G | intergenic (+281/+21) | LY180_06295 → / ← LY180_06300 | thymidine kinase/bifunctional acetaldehyde‑CoA/alcohol dehydrogenase |
| MC JC | 1,335,989 | 2720 bp→18 bp | [LY180_06300]–[LY180_06310] | [LY180_06300], LY180_06305, [LY180_06310] | |
| MC JC | 1,446,672 | Δ2,957 bp | [zntB]–[LY180_06850] | [zntB], LY180_06845, [LY180_06850] | |
| RA | 1,459,895 | C→T | T49T (ACC→ACT) | LY180_06935 → | hypothetical protein |
| RA | 1,464,821 | A→G | intergenic (+486/‑118) | LY180_06955 → / → LY180_06960 | hypothetical protein/regulatory protein |
| RA | 1,505,743 | 2 bp→GT | intergenic (‑91/+19) | LY180_07195 ← / ← LY180_07200 | heat‑inducible protein/hypothetical protein |
| RA | 1,505,880 | T→C | L35L (CTA→CTG) | LY180_07200 ← | hypothetical protein |
| RA | 1,563,237 | T→C | V173A (GTT→GCT) | LY180_07445 → | transposase IS609 |
| RA | 1,563,485 | A→G | T256A (ACC→GCC) | LY180_07445 → | transposase IS609 |
| RA | 1,563,642 | G→A | R308H (CGC→CAC) | LY180_07445 → | transposase IS609 |
| RA | 1,563,706 | C→T | Y329Y (TAC→TAT) | LY180_07445 → | transposase IS609 |
| RA | 1,563,726 | G→A | C336Y (TGC→TAC) | LY180_07445 → | transposase IS609 |
| RA | 1,563,748 | A→G | E343E (GAA→GAG) | LY180_07445 → | transposase IS609 |
| RA | 1,563,751 | T→C | N344N (AAT→AAC) | LY180_07445 → | transposase IS609 |
| RA | 1,588,241 | A→C | E403D (GAA→GAC) | LY180_07560 → | type IV secretion protein Rhs |
| RA | 1,645,301 | T→G | intergenic (+1095/+165) | LY180_07765 → / ← LY180_07770 | transposase/sulfatase |
| RA | 1,645,397 | C→T | intergenic (+1191/+69) | LY180_07765 → / ← LY180_07770 | transposase/sulfatase |
| RA | 1,645,421 | C→G | intergenic (+1215/+45) | LY180_07765 → / ← LY180_07770 | transposase/sulfatase |
| MC JC | 1,749,406 | Δ777 bp | [LY180_08300]–[LY180_08310] | [LY180_08300], LY180_08305, [LY180_08310] | |
| RA | 1,964,559 | G→A | N226N (AAC→AAT) | LY180_09345 ← | transposase IS609 |
| RA | 1,964,699 | C→T | V180I (GTC→ATC) | LY180_09345 ← | transposase IS609 |
| RA | 1,964,727 | G→T | S170S (TCC→TCA) | LY180_09345 ← | transposase IS609 |
| RA | 1,964,784 | A→C | T151T (ACT→ACG) | LY180_09345 ← | transposase IS609 |
| RA | 2,251,239 | G→A | P28P (CCC→CCT) | LY180_10740 ← | hypothetical protein |
| RA | 2,251,586 | T→C | E104E (GAA→GAG) | LY180_10745 ← | major tail tube protein |
| RA | 2,251,616 | A→G | R94R (CGT→CGC) | LY180_10745 ← | major tail tube protein |
| RA | 2,265,347 | G→A | intergenic (‑100/‑74) | LY180_10855 ← / → LY180_10860 | precorrin‑8W decarboxylase/terminase |
| RA | 2,265,396 | A→G | intergenic (‑149/‑25) | LY180_10855 ← / → LY180_10860 | precorrin‑8W decarboxylase/terminase |
| RA | 2,265,399 | G→T | intergenic (‑152/‑22) | LY180_10855 ← / → LY180_10860 | precorrin‑8W decarboxylase/terminase |
| RA | 2,265,885 | C→A | A155A (GCC→GCA) | LY180_10860 → | terminase |
| RA | 2,312,761 | T→A | intergenic (‑71/+448) | LY180_11070 ← / ← LY180_11075 | hypothetical protein/hypothetical protein |
| RA | 2,312,767 | 3 bp→GAC | intergenic (‑77/+440) | LY180_11070 ← / ← LY180_11075 | hypothetical protein/hypothetical protein |
| RA | 2,312,771 | G→A | intergenic (‑81/+438) | LY180_11070 ← / ← LY180_11075 | hypothetical protein/hypothetical protein |
| RA | 2,312,773 | C→G | intergenic (‑83/+436) | LY180_11070 ← / ← LY180_11075 | hypothetical protein/hypothetical protein |
| RA | 2,483,647 | G→A | P236S (CCG→TCG) | LY180_11800 ← | NADH:ubiquinone oxidoreductase subunit M |
| MC JC | 2,505,263 | Δ394 bp | intergenic (‑620/‑500) | LY180_11895 ← / → LY180_11905 | hypothetical protein/phosphate acetyltransferase |
| RA | 2,505,816 | A→G | intergenic (‑1173/‑340) | LY180_11895 ← / → LY180_11905 | hypothetical protein/phosphate acetyltransferase |
| RA | 2,506,026 | T→C | intergenic (‑1383/‑130) | LY180_11895 ← / → LY180_11905 | hypothetical protein/phosphate acetyltransferase |
| MC JC | 2,606,939 | Δ122 bp | LY180_12380 | LY180_12380 | |
| RA | 3,010,362 | G→T | E48* (GAA→TAA) | LY180_14330 → | type VI secretion protein ImpK |
| RA | 3,028,824 | G→A | L110L (CTG→CTA) | LY180_14390 → | hypothetical protein |
| RA | 3,028,828 | G→A | A112T (GCC→ACC) | LY180_14390 → | hypothetical protein |
| RA | 3,278,551 | G→A | W246* (TGG→TGA) | LY180_15575 → | aldehyde oxidoreductase |
| MC JC | 3,431,620 | Δ68 bp | coding (288‑355/879 nt) | LY180_16320 → | protease |
| RA | 3,505,943 | C→T | G41D (GGT→GAT) | LY180_16680 ← | malate dehydrogenase |
| RA | 3,545,689 | T→C | noncoding (2811/2931 nt) | LY180_16870 ← | 23S ribosomal RNA |
| RA | 3,545,692 | C→T | noncoding (2808/2931 nt) | LY180_16870 ← | 23S ribosomal RNA |
| RA | 3,545,695 | G→A | noncoding (2805/2931 nt) | LY180_16870 ← | 23S ribosomal RNA |
| RA | 3,545,697 | A→G | noncoding (2803/2931 nt) | LY180_16870 ← | 23S ribosomal RNA |
| RA | 3,772,505 | A→G | F313F (TTT→TTC) | LY180_18030 ← | glutamate decarboxylase |
| JC | 3,812,239 | (AGA)2→4 | coding (434/1020 nt) | LY180_18170 ← | peptide ABC transporter permease |
| RA | 3,943,262 | G→A | G302D (GGC→GAC) | LY180_18795 → | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase |
| RA | 4,023,563 | T→C | L4P (CTC→CCC) | rnpA → | ribonuclease P |
| RA | 4,178,979 | T→C | noncoding (1009/1541 nt) | LY180_19945 → | 16S ribosomal RNA |
| RA | 4,178,988 | Δ1 bp | noncoding (1018/1541 nt) | LY180_19945 → | 16S ribosomal RNA |
| RA | 4,178,991 | A→T | noncoding (1021/1541 nt) | LY180_19945 → | 16S ribosomal RNA |
| RA | 4,178,993 | +G | noncoding (1023/1541 nt) | LY180_19945 → | 16S ribosomal RNA |
| RA | 4,179,007 | C→T | noncoding (1037/1541 nt) | LY180_19945 → | 16S ribosomal RNA |
| RA | 4,305,124 | G→A | G42G (GGG→GGA) | LY180_20645 → | rhsA |
| RA | 4,305,151 | G→C | P51P (CCG→CCC) | LY180_20645 → | rhsA |
| RA | 4,305,201 | C→G | A68G (GCC→GGC) | LY180_20645 → | rhsA |
| MC JC | 4,394,727 | Δ4,605 bp | LY180_21020–LY180_21030 | LY180_21020, adhP, LY180_21030 | |
| RA | 4,469,025 | +A | coding (748/1350 nt) | LY180_21345 → | permase |
| MC JC | 4,815,129 | Δ342 bp | coding (402‑743/1224 nt) | LY180_23005 → | phosphopentomutase |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP006584 | 1505914 | 1510578 | 4665 | 20 [19] | [19] 20 | [LY180_07200]–[LY180_07220] | [LY180_07200],LY180_07205,LY180_07210,LY180_07215,[LY180_07220] |
| * | * | ÷ | CP006584 | 1644427–1644851 | 1645294–1644922 | 72–868 | 20 [17] | [18] 20 | LY180_07765/LY180_07770 | transposase/sulfatase |
| * | * | ÷ | CP006584 | 3028883–3029265 | 3032186 | 2922–3304 | 20 [19] | [19] 20 | [LY180_14390]–[LY180_14415] | [LY180_14390],LY180_14395,LY180_14400,LY180_14405,LY180_14410,[LY180_14415] |
| * | * | ÷ | CP006584 | 3344949–3346064 | 3377365–3376399 | 30336–32417 | 21 [19] | [18] 20 | ebgC–LY180_16025 | ebgC,LY180_15890,LY180_15895,LY180_15900,fadH,LY180_15910,LY180_15915,LY180_15920,LY180_15925,LY180_15930,LY180_15935,LY180_15940,LY180_15945,LY180_15950,LY180_15955,LY180_15960,LY180_15965,LY180_15970,LY180_15975,LY180_15980,LY180_15985,LY180_15990,LY180_15995,LY180_16000,LY180_16005,LY180_16010,LY180_16015,LY180_16020,LY180_16025 |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP006584 | 5598 = | NA (NA) | 48 (0.780) | 46/560 | 0.4 | 100% | intergenic (+69/‑191) | LY180_00025/LY180_00030 | hypothetical protein/hypothetical protein |
| ? | CP006584 | 2042299 = | 0 (0.000) | intergenic (+87/+78) | LY180_09740/bisC | tRNA methyltransferase/biotin sulfoxide reductase | |||||
| * | ? | CP006584 | 5598 = | NA (NA) | 75 (1.210) | 52/560 | 0.3 | 100% | intergenic (+69/‑191) | LY180_00025/LY180_00030 | hypothetical protein/hypothetical protein |
| ? | CP006584 | 3172592 = | 0 (0.000) | coding (29/273 nt) | LY180_15050 | hypothetical protein | |||||
| * | ? | CP006584 | = 225257 | NA (NA) | 87 (1.360) | 77/582 | 0.0 | NA | noncoding (1014/1541 nt) | LY180_00980 | 16S ribosomal RNA |
| ? | CP006584 | 225269 = | NA (NA) | noncoding (1026/1541 nt) | LY180_00980 | 16S ribosomal RNA | |||||
| * | ? | CP006584 | = 269130 | 35 (0.540) | 43 (0.710) +TCATGTCATTAGTGCGTT |
35/548 | 1.0 | 72.4% | coding (377/414 nt) | LY180_01180 | hypothetical protein |
| ? | CP006584 | 1594499 = | 0 (0.000) | coding (168/909 nt) | LY180_07575 | hypothetical protein | |||||
| * | ? | CP006584 | 294480 = | 25 (0.390) | 32 (0.560) | 32/516 | 1.0 | 51.6% | coding (26/996 nt) | LY180_01335 | hypothetical protein |
| ? | CP006584 | 297564 = | 38 (0.670) | coding (496/1515 nt) | LY180_01350 | tail protein | |||||
| * | ? | CP006584 | = 294513 | 25 (0.390) | 23 (0.400) | 22/516 | 2.0 | 43.4% | coding (59/996 nt) | LY180_01335 | hypothetical protein |
| ? | CP006584 | = 297529 | 38 (0.670) | coding (531/1515 nt) | LY180_01350 | tail protein | |||||
| * | ? | CP006584 | 346068 = | NA (NA) | 69 (1.070) | 54/584 | 0.3 | 94.5% | intergenic (‑51/‑107) | LY180_01675/LY180_01680 | CadC family transcriptional regulator/hypothetical protein |
| ? | CP006584 | = 363812 | 4 (0.060) | intergenic (‑39/‑249) | LY180_01770/LY180_01775 | outer membrane phosphoporin protein E/gamma‑glutamyl kinase | |||||
| * | ? | CP006584 | = 347397 | 86 (1.340) | 83 (1.290) | 82/582 | 0.0 | 66.0% | intergenic (+14/‑444) | LY180_01680/LY180_01685 | hypothetical protein/flagellin |
| ? | CP006584 | 363805 = | 0 (0.000) | intergenic (‑32/‑256) | LY180_01770/LY180_01775 | outer membrane phosphoporin protein E/gamma‑glutamyl kinase | |||||
| * | ? | CP006584 | 794676 = | NA (NA) | 47 (0.740) | 43/574 | 0.6 | NA | coding (1871/4200 nt) | LY180_03720 | rhsA |
| ? | CP006584 | = 794771 | NA (NA) | coding (1966/4200 nt) | LY180_03720 | rhsA | |||||
| * | ? | CP006584 | 840689 = | 37 (0.570) | 45 (0.780) | 35/522 | 0.8 | 53.5% | intergenic (+68/‑82) | LY180_03930/LY180_03935 | tRNA‑Lys/tRNA‑Val |
| ? | CP006584 | = 841381 | 45 (0.780) | intergenic (+125/‑280) | LY180_03950/LY180_03955 | tRNA‑Lys/quinolinate synthetase | |||||
| * | ? | CP006584 | 917080 = | NA (NA) | 57 (0.890) | 53/578 | 0.3 | 100% | intergenic (+88/‑191) | LY180_04320/LY180_04325 | heme ABC transporter ATP‑binding protein/hypothetical protein |
| ? | CP006584 | = 2414713 | 0 (0.000) | coding (1017/1644 nt) | LY180_11545 | multidrug ABC transporter ATP‑binding protein | |||||
| * | ? | CP006584 | = 918356 | NA (NA) | 46 (0.720) | 41/576 | 0.7 | 100% | intergenic (+105/+151) | LY180_04325/LY180_04330 | hypothetical protein/hypothetical protein |
| ? | CP006584 | = 2042300 | 0 (0.000) | intergenic (+88/+77) | LY180_09740/bisC | tRNA methyltransferase/biotin sulfoxide reductase | |||||
| * | ? | CP006584 | 1014953 = | 2 (0.030) | 44 (0.680) | 44/584 | 0.6 | 95.7% | coding (576/858 nt) | LY180_04750 | formate transporter |
| ? | CP006584 | 1749406 = | NA (NA) | coding (13/864 nt) | LY180_08300 | transcriptional regulator | |||||
| * | ? | CP006584 | = 1014961 | 0 (0.000) | 66 (1.030) | 64/584 | 0.1 | 100% | coding (568/858 nt) | LY180_04750 | formate transporter |
| ? | CP006584 | = 3190836 | NA (NA) | coding (259/285 nt) | LY180_15150 | hypothetical protein | |||||
| * | ? | CP006584 | 1643563 = | 39 (0.610) | 83 (1.330) | 62/564 | 0.1 | 81.5% | intergenic (‑223/‑80) | LY180_07760/LY180_07765 | sulfatase/transposase |
| ? | CP006584 | = 4565632 | 0 (0.000) | intergenic (‑372/+82) | LY180_21775/LY180_21780 | hypothetical protein/lysine 2,3‑aminomutase | |||||
| * | ? | CP006584 | 1665266 = | NA (NA) | 77 (1.200) | 67/584 | 0.1 | 98.7% | intergenic (‑237/+13) | LY180_07835/LY180_07840 | hypothetical protein/hypothetical protein |
| ? | CP006584 | 1671273 = | 1 (0.020) | coding (590/699 nt) | LY180_07865 | GntR family transcriptional regulator | |||||
| * | ? | CP006584 | = 1671281 | 1 (0.020) | 69 (1.070) | 64/584 | 0.1 | 98.6% | coding (598/699 nt) | LY180_07865 | GntR family transcriptional regulator |
| ? | CP006584 | = 1686277 | NA (NA) | intergenic (‑107/‑40) | LY180_07935/LY180_07940 | hypothetical protein/DNA invertase | |||||
| * | ? | CP006584 | 1749406 = | NA (NA) | 85 (1.320) | 74/584 | 0.0 | 98.8% | coding (13/864 nt) | LY180_08300 | transcriptional regulator |
| ? | CP006584 | = 3920817 | 1 (0.020) | coding (415/984 nt) | LY180_18670 | beta1,3‑glucosyltransferase | |||||
| * | ? | CP006584 | = 1750173 | NA (NA) | 80 (1.240) | 75/584 | 0.0 | 100% | coding (380/384 nt) | LY180_08310 | gdgsA |
| ? | CP006584 | 3920810 = | 0 (0.000) | coding (422/984 nt) | LY180_18670 | beta1,3‑glucosyltransferase | |||||
| * | ? | CP006584 | 1840765 = | 2 (0.030) | 47 (0.730) | 43/584 | 0.6 | 95.9% | intergenic (+248/‑63) | LY180_08735/LY180_08740 | pyruvate kinase/murein lipoprotein |
| ? | CP006584 | = 1840785 | NA (NA) | intergenic (+268/‑43) | LY180_08735/LY180_08740 | pyruvate kinase/murein lipoprotein | |||||
| * | ? | CP006584 | 2030792 = | NA (NA) | 57 (0.900) | 53/576 | 0.3 | 100% | intergenic (+74/+105) | znuB/LY180_09680 | zinc transporter/hypothetical protein |
| ? | CP006584 | 2414712 = | 0 (0.000) | coding (1018/1644 nt) | LY180_11545 | multidrug ABC transporter ATP‑binding protein | |||||
| * | ? | CP006584 | 2385043 = | 1 (0.020) | 52 (0.810) | 48/582 | 0.4 | 98.1% | coding (718/1026 nt) | LY180_11390 | microcin C ABC transporter permease |
| ? | CP006584 | 2565085 = | NA (NA) | intergenic (+71/‑106) | LY180_12185/LY180_12190 | D‑serine dehydratase/hypothetical protein | |||||
| * | ? | CP006584 | = 2385052 | 1 (0.020) | 46 (0.710) | 45/584 | 0.6 | 97.9% | coding (727/1026 nt) | LY180_11390 | microcin C ABC transporter permease |
| ? | CP006584 | 2565084 = | NA (NA) | intergenic (+70/‑107) | LY180_12185/LY180_12190 | D‑serine dehydratase/hypothetical protein | |||||
| * | ? | CP006584 | = 2891935 | NA (NA) | 83 (1.290) | 76/582 | 0.0 | 100% | intergenic (+12/+249) | LY180_13750/LY180_13755 | hypothetical protein/transcriptional regulator |
| ? | CP006584 | = 3268631 | 0 (0.000) | coding (88/1119 nt) | LY180_15515 | hydrogenase 2 small subunit | |||||
| * | ? | CP006584 | 2896407 = | NA (NA) | 56 (0.880) | 53/576 | 0.3 | 100% | intergenic (+63/+105) | LY180_13765/LY180_13770 | 6‑phospho‑beta‑glucosidase/transposase |
| ? | CP006584 | 3262157 = | 0 (0.000) | intergenic (+107/+16) | LY180_15475/LY180_15480 | GSH‑dependent disulfide bond oxidoreductase/hydrogenase 2 accessory protein HypG | |||||
| * | ? | CP006584 | = 3172593 | 0 (0.000) | 98 (1.540) | 81/576 | 0.0 | 100% | coding (28/273 nt) | LY180_15050 | hypothetical protein |
| ? | CP006584 | 4311141 = | NA (NA) | intergenic (‑130/+105) | LY180_20655/LY180_20660 | hypothetical protein/hypothetical protein | |||||
| * | ? | CP006584 | = 3262158 | 0 (0.000) | 57 (0.920) | 48/560 | 0.4 | 100% | intergenic (+108/+15) | LY180_15475/LY180_15480 | GSH‑dependent disulfide bond oxidoreductase/hydrogenase 2 accessory protein HypG |
| ? | CP006584 | = 4312417 | NA (NA) | intergenic (‑191/+57) | LY180_20660/LY180_20665 | hypothetical protein/transcriptional regulator | |||||
| * | ? | CP006584 | 3268622 = | 2 (0.030) | 67 (1.040) | 57/584 | 0.2 | 97.1% | coding (97/1119 nt) | LY180_15515 | hydrogenase 2 small subunit |
| ? | CP006584 | 3344744 = | NA (NA) | coding (163/330 nt) | LY180_15880 | hypothetical protein | |||||
| * | ? | CP006584 | 3305035 = | 2 (0.030) | 62 (0.970) | 53/582 | 0.3 | 96.9% | intergenic (‑341/‑33) | ribB/LY180_15715 | 3,4‑dihydroxy‑2‑butanone 4‑phosphate synthase/hypothetical protein |
| ? | CP006584 | = 3672182 | NA (NA) | coding (475/477 nt) | LY180_17575 | membrane protein | |||||
| * | ? | CP006584 | = 3305045 | 3 (0.050) | 71 (1.110) | 66/582 | 0.1 | 96.0% | intergenic (‑351/‑23) | ribB/LY180_15715 | 3,4‑dihydroxy‑2‑butanone 4‑phosphate synthase/hypothetical protein |
| ? | CP006584 | 3344745 = | NA (NA) | coding (164/330 nt) | LY180_15880 | hypothetical protein | |||||
| * | ? | CP006584 | 3305882 = | 3 (0.050) | 95 (1.480) | 73/584 | 0.0 | 96.9% | coding (242/552 nt) | LY180_15720 | fimbrial protein |
| ? | CP006584 | 3344744 = | NA (NA) | coding (163/330 nt) | LY180_15880 | hypothetical protein | |||||
| * | ? | CP006584 | = 3305890 | 2 (0.030) | 107 (1.660) | 85/584 | 0.0 | 98.2% | coding (250/552 nt) | LY180_15720 | fimbrial protein |
| ? | CP006584 | = 3672183 | NA (NA) | coding (474/477 nt) | LY180_17575 | membrane protein | |||||
| * | ? | CP006584 | 3379202 = | 0 (0.000) | 63 (0.980) | 55/584 | 0.2 | 100% | intergenic (+70/‑172) | LY180_16040/LY180_16045 | membrane protein/membrane protein |
| ? | CP006584 | = 3672183 | NA (NA) | coding (474/477 nt) | LY180_17575 | membrane protein | |||||
| * | ? | CP006584 | = 3379210 | 4 (0.060) | 103 (1.600) | 83/584 | 0.0 | 96.3% | intergenic (+78/‑164) | LY180_16040/LY180_16045 | membrane protein/membrane protein |
| ? | CP006584 | = 3672183 | NA (NA) | coding (474/477 nt) | LY180_17575 | membrane protein | |||||
| * | ? | CP006584 | 3513901 = | 35 (0.540) | 25 (0.410) +TCGGATAAGGCGTTT |
21/554 | 2.4 | 45.2% | intergenic (‑77/+262) | tldD/LY180_16725 | protease TldD/membrane protein |
| ? | CP006584 | = 3514068 | 29 (0.450) | intergenic (‑244/+95) | tldD/LY180_16725 | protease TldD/membrane protein | |||||
| * | ? | CP006584 | = 3884875 | 80 (1.240) | 61 (0.950) | 56/582 | 0.2 | 44.7% | coding (905/1137 nt) | LY180_18515 | membrane protein |
| ? | CP006584 | 3885089 = | 71 (1.110) | coding (691/1137 nt) | LY180_18515 | membrane protein | |||||
| * | ? | CP006584 | 4186759 = | NA (NA) | 105 (1.640) | 88/582 | 0.0 | 100% | coding (292/294 nt) | LY180_19995 | hypothetical protein |
| ? | CP006584 | 4334567 = | 0 (0.000) | coding (30/1734 nt) | LY180_20755 | membrane protein | |||||
| * | ? | CP006584 | = 4188086 | NA (NA) | 73 (1.130) | 68/584 | 0.1 | 97.3% | coding (17/1167 nt) | LY180_20005 | hypothetical protein |
| ? | CP006584 | = 4334576 | 2 (0.030) | coding (21/1734 nt) | LY180_20755 | membrane protein | |||||
| * | ? | CP006584 | 4496128 = | NA (NA) | 63 (1.070) | 59/536 | 0.1 | 98.6% | intergenic (‑2037/‑83) | LY180_21445/LY180_21450 | hypothetical protein/hypothetical protein |
| ? | CP006584 | 4565632 = | 1 (0.020) | intergenic (‑372/+82) | LY180_21775/LY180_21780 | hypothetical protein/lysine 2,3‑aminomutase | |||||
| * | ? | CP006584 | 4496731 = | NA (NA) | 344 (5.340) | 252/584 | 0.0 | NA | coding (521/1209 nt) | LY180_21450 | hypothetical protein |
| ? | CP006584 | = 4497432 | NA (NA) | intergenic (+13/+464) | LY180_21450/LY180_21455 | hypothetical protein/D‑allose kinase | |||||