Fri Apr 10 00:39:20 2020

/usr/bin/breseq-0.33.1-Linux-x86_64/bin/breseq -j 1 --consensus-frequency-cutoff=0.75 --require-match-fraction=0.95 -o breseq_processes/4 -r /var/data/Ecoli_LY180_CP006584.gb /var/alemutpipe-outputs/good/SRR4111262_R1.good.fq.gz /var/alemutpipe-outputs/good/SRR4111262_R2.good.fq.gz