mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | ||||||
|---|---|---|---|---|---|---|
| evidence | position | mutation | freq | annotation | gene | description |
| RA | 5,439 | A→C | 12.8% | H69P (CAC→CCC) | Y75_RS00030 → | DUF2502 domain‑containing protein |
| RA | 12,484 | C→A | 15.9% | Q108K (CAG→AAG) | dnaK → | molecular chaperone DnaK |
| RA | 46,798 | A→G | 9.5% | D331G (GAT→GGT) | Y75_RS00235 → | MFS transporter |
| RA | 117,417 | T→G | 12.0% | T45P (ACC→CCC) | ppdD ← | prepilin peptidase‑dependent pilin |
| RA | 131,380 | T→G | 13.8% | intergenic (‑120/‑235) | Y75_RS00595 ← / → acnB | DUF3300 domain‑containing protein/bifunctional aconitate hydratase 2/2‑methylisocitrate dehydratase |
| RA | 220,098 | G→A | 10.4% | intergenic (‑103/+15) | rcsF ← / ← metQ | Rcs stress response system protein RcsF/methionine ABC transporter substrate‑binding lipoprotein MetQ |
| RA | 249,538 | T→G | 30.4% | H187P (CAC→CCC) | flhA ← | flagellar type III secretion system protein FlhA |
| RA | 432,873 | T→G | 25.5% | G65G (GGT→GGG) | ribD → | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase RibD |
| RA | 456,415 | G→T | 14.0% | G172V (GGT→GTT) | clpP → | ATP‑dependent Clp endopeptidase proteolytic subunit ClpP |
| RA | 547,694 | A→G | 100% | E38E (GAA→GAG) | Y75_RS02655 → | hypothetical protein |
| RA | 547,831:1 | +G | 100% | coding (251/261 nt) | Y75_RS02655 → | hypothetical protein |
| RA | 556,858 | A→T | 100% | L36Q (CTG→CAG) | folD ← | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD |
| RA | 623,178 | G→T | 13.8% | Q186K (CAA→AAA) | fepB ← | Fe2+‑enterobactin ABC transporter substrate‑binding protein |
| MC JC | 654,214 | Δ1,199 bp | 100% | Y75_RS03225–[dcuC] | Y75_RS03225, [dcuC] | |
| JC | 694,571 | Δ88 bp | 85.4% | coding (720‑807/1425 nt) | miaB ← | tRNA (N6‑isopentenyl adenosine(37)‑C2)‑methylthiotransferase MiaB |
| RA | 776,480 | T→G | 9.0% | G70G (GGT→GGG) | tolR → | colicin uptake protein TolR |
| RA | 802,540 | A→C | 15.5% | T78P (ACC→CCC) | Y75_RS04020 → | anion permease |
| RA | 954,796 | C→G | 9.6% | P31P (CCG→CCC) | focA ← | formate transporter FocA |
| RA | 954,817 | G→A | 11.6% | V24V (GTC→GTT) | focA ← | formate transporter FocA |
| RA | 1,046,494 | A→C | 11.5% | V625G (GTA→GGA) | Y75_RS05125 ← | YjbH domain‑containing protein |
| RA | 1,063,614 | A→C | 13.8% | V195G (GTG→GGG) | cbpA ← | curved DNA‑binding protein |
| RA | 1,065,700 | C→T | 100% | R415C (CGT→TGT) | Y75_RS05220 → | YccE family protein |
| RA | 1,093,686 | T→C | 100% | V130A (GTA→GCA) | Y75_RS05355 → | GGDEF domain‑containing protein |
| RA | 1,239,439 | A→C | 10.3% | T98P (ACC→CCC) | Y75_RS06220 → | D‑amino acid dehydrogenase |
| RA | 1,249,435 | A→C | 9.7% | G419G (GGT→GGG) | dhaM ← | dihydroxyacetone kinase subunit DhaM |
| RA | 1,288,141 | T→G | 9.9% | intergenic (+38/+146) | narI → / ← Y75_RS06440 | respiratory nitrate reductase subunit gamma/RtT sRNA |
| RA | 1,303,712 | A→G | 100% | S273G (AGC→GGC) | oppA → | oligopeptide ABC transporter substrate‑binding protein OppA |
| RA | 1,327,694 | A→T | 17.8% | Y412F (TAC→TTC) | Y75_RS06660 → | DUF2207 domain‑containing protein |
| RA | 1,327,721 | C→G | 7.9% | A421G (GCA→GGA) | Y75_RS06660 → | DUF2207 domain‑containing protein |
| RA | 1,378,854 | A→C | 17.9% | K103N (AAA→AAC) | Y75_RS06935 → | Gfo/Idh/MocA family oxidoreductase |
| RA | 1,385,432 | C→A | 12.2% | E82* (GAA→TAA) | Y75_RS06960 ← | LacI family transcriptional regulator |
| MC JC | 1,413,639 | Δ23,060 bp | 100% | [ttcA]–Y75_RS24865 | 33 genes [ttcA], Y75_RS23540, xisR, rcbA, ralR, recT, recE, Y75_RS07140, Y75_RS07145, kilR, Y75_RS07155, Y75_RS07160, racR, ydaS, Y75_RS07175, Y75_RS07180, Y75_RS07185, Y75_RS07190, rzoD, Y75_RS07200, Y75_RS07205, Y75_RS07210, Y75_RS07215, Y75_RS07220, Y75_RS07225, Y75_RS07230, Y75_RS07235, Y75_RS23570, Y75_RS07255, Y75_RS07260, ydfK, Y75_RS24860, Y75_RS24865 |
|
| RA | 1,521,793 | C→G | 10.7% | intergenic (+15/‑183) | curA → / → Y75_RS07665 | NADPH‑dependent curcumin/dihydrocurcumin reductase/DNA‑binding transcriptional regulator McbR |
| RA | 1,555,745 | C→G | 14.9% | A547P (GCC→CCC) | Y75_RS07805 ← | malate dehydrogenase |
| RA | 1,719,676 | C→T | 9.4% | E16K (GAA→AAA) | pdxH ← | pyridoxamine 5'‑phosphate oxidase |
| RA | 1,739,298 | A→G | 100% | intergenic (‑39/‑260) | ynhF ← / → purR | stress response protein YnhF/HTH‑type transcriptional repressor PurR |
| RA | 2,016,354 | C→A | 16.1% | A330E (GCA→GAA) | fliF → | flagellar basal body M‑ring protein FliF |
| RA | 2,120,992 | A→T | 85.3% | L435Q (CTG→CAG) | wzxC ← | M‑antigen undecaprenyl disphosphate flippase |
| RA | 2,153,826 | G→T | 24.9% | intergenic (+43/+22) | Y75_RS10870 → / ← pphC | YegJ family protein/protein‑serine/threonine phosphatase PphC |
| RA | 2,171,103 | A→C | 14.1% | I85I (ATA→ATC) | yegS → | lipid kinase YegS |
| MC JC | 2,176,983 | Δ1,199 bp | 100% | Y75_RS10980–[gatA] | Y75_RS10980, [gatA] | |
| RA | 2,208,987 | C→T | 11.3% | A353V (GCT→GTT) | Y75_RS11115 → | MoxR family ATPase |
| MC JC | 2,320,795 | Δ1,336 bp | 100% | Y75_RS11650–[rcsC] | Y75_RS11650, Y75_RS11650, [rcsC] | |
| RA | 2,418,598 | T→C | 15.5% | intergenic (‑20/‑318) | Y75_RS12065 ← / → ackA | DUF412 domain‑containing protein/acetate kinase |
| RA | 2,583,716 | A→G | 8.3% | S156P (TCC→CCC) | aegA ← | formate‑dependent uric acid utilization protein AegA |
| RA | 2,606,887 | A→G | 21.0% | M439V (ATG→GTG) | hyfF → | hydrogenase 4 subunit F |
| RA | 2,660,468 | T→A | 100% | H107L (CAC→CTC) | iscR ← | Fe‑S cluster assembly transcriptional regulator IscR |
| RA | 2,676,389 | T→C | 9.0% | E210G (GAA→GGA) | Y75_RS13325 ← | sugar ABC transporter ATP‑binding protein |
| RA | 2,787,258 | C→T | 11.0% | pseudogene (961/1008 nt) | Y75_RS24085 → | alpha amylase |
| RA | 2,866,109 | C→A | 100% | pseudogene (99/993 nt) | rpoS ← | RNA polymerase sigma factor RpoS |
| RA | 2,877,655 | A→T | 7.8% | S258R (AGT→AGA) | cas1e ← | type I‑E CRISPR‑associated endonuclease Cas1 |
| RA | 2,906,975 | C→G | 100% | D450H (GAC→CAC) | pyrG ← | CTP synthase (glutamine hydrolyzing) |
| RA | 2,911,891 | T→G | 100% | L139F (TTA→TTC) | Y75_RS14515 ← | GTP pyrophosphokinase |
| RA | 2,939,008 | A→C | 8.7% | C298G (TGC→GGC) | rlmM ← | 23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM |
| RA | 2,976,822 | T→A | 11.7% | Y245F (TAT→TTT) | lysA ← | diaminopimelate decarboxylase |
| RA | 3,063,461 | G→A | 12.5% | E2K (GAA→AAA) | scpC → | propionyl‑CoA:succinate CoA transferase |
| RA | 3,205,094 | G→A | 17.1% | intergenic (‑182/‑25) | ttdR ← / → ttdA | DNA‑binding transcriptional activator TtdR/L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,127 | C→G | 8.8% | S3R (AGC→AGG) | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,132 | G→A | 14.3% | S5N (AGT→AAT) ‡ | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,133 | T→A | 18.7% | S5R (AGT→AGA) ‡ | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,139 | G→A | 14.8% | K7K (AAG→AAA) | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,140 | C→A | 16.8% | Q8K (CAA→AAA) | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,147 | C→A | 14.5% | A10E (GCA→GAA) | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,162 | C→A | 12.4% | T15K (ACA→AAA) | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| MC JC | 3,261,134 | Δ1,199 bp | 100% | Y75_RS16205–[tdcD] | Y75_RS16205, [tdcD] | |
| RA | 3,447,067 | A→C | 9.4% | intergenic (‑172/+41) | Y75_RS17145 ← / ← rpoC | heat‑shock protein C/DNA‑directed RNA polymerase subunit beta' |
| RA | 3,448,400 | G→A | 15.9% | R978C (CGT→TGT) | rpoC ← | DNA‑directed RNA polymerase subunit beta' |
| RA | 3,545,595 | T→G | 25.4% | P427P (CCT→CCG) | Y75_RS17610 → | PTS fructose‑like transporter subunit IIBC |
| RA | 3,560,804 | T→G | 11.5% | T109P (ACC→CCC) | yihX ← | glucose‑1‑phosphatase |
| RA | 3,609,469 | G→C | 13.2% | A229G (GCG→GGG) | fre ← | NAD(P)H‑flavin reductase |
| RA | 3,609,535 | G→C | 7.5% | A207G (GCG→GGG) | fre ← | NAD(P)H‑flavin reductase |
| RA | 3,645,110 | A→T | 100% | L140Q (CTG→CAG) | cyaA ← | class I adenylate cyclase |
| RA | 3,656,455 | C→T | 100% | V91I (GTT→ATT) | rffM ← | lipopolysaccharide N‑acetylmannosaminouronosyltransferase |
| RA | 3,657,819 | T→G | 12.3% | T88P (ACC→CCC) | wzyE ← | O‑antigen assembly polymerase |
| RA | 3,741,196 | C→G | 10.8% | R375R (CGC→CGG) | Y75_RS18545 → | adenine permease AdeP |
| MC JC | 3,742,936 | Δ1,336 bp | 100% | Y75_RS18560–Y75_RS18560 | Y75_RS18560, Y75_RS18560 | |
| MC JC | 3,746,911 | Δ1,199 bp | 100% | Y75_RS18585–[tnaB] | Y75_RS18585, [tnaB] | |
| MC JC | 3,750,591 | Δ1,199 bp | 100% | Y75_RS18600 | Y75_RS18600 | |
| RA | 3,857,502 | T→G | 20.4% | V250G (GTG→GGG) | gpsA → | NAD(P)H‑dependent glycerol‑3‑phosphate dehydrogenase |
| RA | 3,878,107 | T→C | 26.2% | G42G (GGA→GGG) | Y75_RS19225 ← | RHS element protein RhsA |
| RA | 3,942,639 | T→C | 5.9% | D440G (GAT→GGT) | bcsE ← | cellulose biosynthesis protein BcsE |
| RA | 4,044,279 | A→G | 6.1% | S90G (AGT→GGT) | livH → | high‑affinity branched‑chain amino acid ABC transporter permease LivH |
| RA | 4,119,568 | C→A | 7.9% | Q58K (CAA→AAA) | hofP → | DNA utilization protein HofP |
| RA | 4,154,031 | G→T | 8.5% | A89E (GCG→GAG) | crp ← | cAMP‑activated global transcriptional regulator CRP |
| RA | 4,245,517 | T→A | 9.0% | T110S (ACC→TCC) | Y75_RS21020 ← | D‑xylose transporter XylE |
| RA | 4,371,271 | Δ2 bp | 100% | pseudogene (182‑183/1304 nt) | Y75_RS21600 ← | anaerobic C4‑dicarboxylate transporter |
| RA | 4,446,876 | T→A | 9.6% | intergenic (‑20/‑186) | msrA ← / → tamA | peptide‑methionine (S)‑S‑oxide reductase MsrA/autotransporter assembly complex protein TamA |
| RA | 4,458,032 | A→G | 9.0% | E260G (GAG→GGG) | Y75_RS22070 → | ABC transporter permease |
| RA | 4,479,381 | C→A | 8.9% | T193N (ACT→AAT) | Y75_RS22170 → | TetR/AcrR family transcriptional regulator |
| RA | 4,495,938 | A→G | 24.8% | I423T (ATT→ACT) | idnT ← | gnt‑II system L‑idonate transporter |
| RA | 4,527,463 | T→G | 14.3% | T438P (ACC→CCC) | Y75_RS22420 ← | xylonate dehydratase YjhG |
| RA | 4,611,582 | A→G | 16.0% | S267P (TCC→CCC) | rsmC ← | 16S rRNA (guanine(1207)‑N(2))‑methyltransferase RsmC |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_007779 | 1301041–1302370 | 1302407 | 38–1367 | 165 [0] | [0] 168 | Y75_RS06530–Y75_RS06530 | Y75_RS06530,Y75_RS06530 |
| * | * | ÷ | NC_007779 | 1397879–1398957 | 1406267 | 7311–8389 | 53 [51] | [0] 130 | [Y75_RS07025]–[Y75_RS07065] | [Y75_RS07025],Y75_RS07030,uspE,Y75_RS07040,ogt,abgT,Y75_RS07060,[Y75_RS07065] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | 273180 = | NA (NA) | 154 (1.000) | 85/380 | NT | 100% | intergenic (+3/+145) | Y75_RS01330/Y75_RS01335 | hypothetical protein/IS5‑like element IS5 family transposase |
| ? | NC_007779 | 701988 = | 0 (0.000) | coding (29/1221 nt) | nagC | DNA‑binding transcriptional regulator NagC | |||||
| * | ? | NC_007779 | = 573581 | 79 (0.510) | 26 (0.170) | 24/382 | NT | 24.8% | intergenic (+19/+379) | quuD/Y75_RS02845 | antitermination protein QuuD/IS5‑like element IS5 family transposase |
| ? | NC_007779 | 573814 = | NA (NA) | intergenic (+252/+146) | quuD/Y75_RS02845 | antitermination protein QuuD/IS5‑like element IS5 family transposase | |||||
| * | ? | NC_007779 | 607256 = | NA (NA) | 10 (0.080) | 8/330 | NT | 6.7% | intergenic (+45/‑32) | Y75_RS03010/Y75_RS03015 | type I toxin‑antitoxin system toxin HokE/IS4‑like element IS421 family transposase |
| ? | NC_007779 | 608549 = | 161 (1.040) | intergenic (+149/+133) | Y75_RS03015/entD | IS4‑like element IS421 family transposase/enterobactin synthase subunit EntD | |||||
| * | ? | NC_007779 | = 689467 | NA (NA) | 137 (0.890) | 76/382 | NT | 100% | intergenic (‑32/+298) | Y75_RS03405/lnt | IS5‑like element IS5 family transposase/apolipoprotein N‑acyltransferase |
| ? | NC_007779 | = 701992 | 0 (0.000) | coding (25/1221 nt) | nagC | DNA‑binding transcriptional regulator NagC | |||||
| * | ? | NC_007779 | 1106373 = | NA (NA) | 16 (0.110) | 5/360 | NT | 73.9% | coding (174/914 nt) | Y75_RS05455 | IS3‑like element IS2 family transposase |
| ? | NC_007779 | 1106739 = | 6 (0.040) | coding (168/361 nt) | Y75_RS05455 | IS3‑like element IS2 family transposase | |||||
| * | ? | NC_007779 | 1209367 = | 95 (0.620) | 91 (0.640) | 64/350 | NT | 58.1% | coding (290/630 nt) | Y75_RS06020 | hypothetical protein |
| ? | NC_007779 | 1211196 = | 44 (0.310) | intergenic (‑6/‑66) | Y75_RS06035/pinE | tail fiber protein/site‑specific DNA recombinase | |||||
| * | ? | NC_007779 | = 1209382 | 95 (0.620) | 75 (0.530) | 53/350 | NT | 53.4% | coding (305/630 nt) | Y75_RS06020 | hypothetical protein |
| ? | NC_007779 | = 1211179 | 44 (0.310) | coding (12/495 nt) | Y75_RS06035 | tail fiber protein | |||||
| * | ? | NC_007779 | 1294773 = | 161 (1.040) | 67 (0.430) | 50/382 | NT | 29.4% | intergenic (‑274/‑331) | hns/tdk | DNA‑binding transcriptional regulator H‑NS/thymidine kinase |
| ? | NC_007779 | = 1398952 | NA (NA) | intergenic (+146/‑127) | Y75_RS07025/Y75_RS07030 | IS5‑like element IS5 family transposase/DUF2534 family protein | |||||
| * | ? | NC_007779 | = 1294776 | 163 (1.060) | 53 (0.340) | 39/382 | NT | 24.5% | intergenic (‑277/‑328) | hns/tdk | DNA‑binding transcriptional regulator H‑NS/thymidine kinase |
| ? | NC_007779 | 1397758 = | NA (NA) | intergenic (‑122/‑32) | ynaI/Y75_RS07025 | low conductance mechanosensitive channel YnaI/IS5‑like element IS5 family transposase | |||||
| * | ? | NC_007779 | = 1301040 | 0 (0.000) | 114 (0.870) +28 bp |
60/326 | NT | 100% | intergenic (+218/‑45) | ychE/Y75_RS06530 | NAAT family transporter YchE/IS3‑like element IS2 family transposase |
| ? | NC_007779 | = 4311564 | NA (NA) | pseudogene (914/921 nt) | alsK | allose kinase | |||||
| * | ? | NC_007779 | 1302408 = | 0 (0.000) | 158 (1.020) | 96/382 | NT | 100% | intergenic (+50/‑488) | Y75_RS06530/oppA | IS3‑like element IS2 family transposase/oligopeptide ABC transporter substrate‑binding protein OppA |
| ? | NC_007779 | 1397758 = | NA (NA) | intergenic (‑122/‑32) | ynaI/Y75_RS07025 | low conductance mechanosensitive channel YnaI/IS5‑like element IS5 family transposase | |||||
| * | ? | NC_007779 | 1406268 = | 0 (0.000) | 124 (0.800) | 78/382 | NT | 100% | coding (12/1311 nt) | Y75_RS07065 | p‑aminobenzoyl‑glutamate hydrolase subunit AbgA |
| ? | NC_007779 | 1980209 = | NA (NA) | intergenic (‑298/+146) | flhD/Y75_RS09980 | flagellar transcriptional regulator FlhD/IS5‑like element IS5 family transposase | |||||
| * | ? | NC_007779 | 1885208 = | 2 (0.010) | 157 (1.020) | 83/382 | NT | 98.7% | coding (307/1446 nt) | Y75_RS09485 | BCCT family transporter |
| ? | NC_007779 | 2411458 = | NA (NA) | intergenic (‑147/+15) | lrhA/Y75_RS12035 | transcriptional regulator LrhA/IS1‑like element IS1A family transposase | |||||
| * | ? | NC_007779 | = 1885215 | 5 (0.030) | 158 (1.020) | 90/382 | NT | 96.9% | coding (314/1446 nt) | Y75_RS09485 | BCCT family transporter |
| ? | NC_007779 | = 2412225 | NA (NA) | intergenic (‑55/‑782) | Y75_RS12035/Y75_RS12040 | IS1‑like element IS1A family transposase/alanine transaminase AlaA | |||||
| * | ? | NC_007779 | 1909106 = | 0 (0.000) | 180 (1.170) | 88/382 | NT | 100% | coding (44/210 nt) | cspE | transcription antiterminator/RNA stability regulator CspE |
| ? | NC_007779 | 2176983 = | NA (NA) | intergenic (‑3/‑32) | gatA/Y75_RS10980 | PTS galactitol transporter subunit IIA/IS5‑like element IS5 family transposase | |||||
| * | ? | NC_007779 | = 1909109 | 0 (0.000) | 114 (0.740) | 79/382 | NT | 100% | coding (41/210 nt) | cspE | transcription antiterminator/RNA stability regulator CspE |
| ? | NC_007779 | 1980209 = | NA (NA) | intergenic (‑298/+146) | flhD/Y75_RS09980 | flagellar transcriptional regulator FlhD/IS5‑like element IS5 family transposase | |||||
| * | ? | NC_007779 | 2279166 = | 70 (0.450) | 6 (0.040) | 6/366 | NT | 7.9% | coding (560/1026 nt) | Y75_RS11435 | ABC transporter permease |
| ? | NC_007779 | 2279202 = | 73 (0.490) | coding (596/1026 nt) | Y75_RS11435 | ABC transporter permease | |||||
| * | ? | NC_007779 | = 2293446 | NA (NA) | 11 (0.070) | 8/380 | NT | 6.0% | intergenic (‑31/‑388) | Y75_RS11495/narP | IS5‑like element IS5 family transposase/nitrate/nitrite response regulator protein NarP |
| ? | NC_007779 | 2477405 = | 173 (1.120) | coding (104/519 nt) | Y75_RS12365 | hypothetical protein | |||||
| * | ? | NC_007779 | 3748316 = | 0 (0.000) | 168 (1.090) | 84/382 | NT | 100% | pseudogene (665/873 nt) | tnaB | low affinity tryptophan permease TnaB |
| ? | NC_007779 | = 4056987 | NA (NA) | coding (391/417 nt) | Y75_RS20060 | hypothetical protein | |||||
| * | ? | NC_007779 | = 3748324 | 3 (0.020) | 118 (0.770) | 70/382 | NT | 97.5% | pseudogene (657/873 nt) | tnaB | low affinity tryptophan permease TnaB |
| ? | NC_007779 | 4056220 = | NA (NA) | intergenic (‑209/+15) | Y75_RS25055/Y75_RS20055 | hypothetical protein/IS1‑like element IS1A family transposase | |||||
| * | ? | NC_007779 | 4056221 = | NA (NA) | 124 (0.810) | 82/380 | NT | 97.6% | intergenic (‑210/+14) | Y75_RS25055/Y75_RS20055 | hypothetical protein/IS1‑like element IS1A family transposase |
| ? | NC_007779 | 4370787 = | 3 (0.020) | pseudogene (667/1304 nt) | Y75_RS21600 | anaerobic C4‑dicarboxylate transporter | |||||
| * | ? | NC_007779 | = 4056987 | NA (NA) | 182 (1.180) | 104/382 | NT | 97.8% | coding (391/417 nt) | Y75_RS20060 | hypothetical protein |
| ? | NC_007779 | = 4370795 | 4 (0.030) | pseudogene (659/1304 nt) | Y75_RS21600 | anaerobic C4‑dicarboxylate transporter | |||||
| * | ? | NC_007779 | = 4310362 | 0 (0.000) | 207 (1.370) | 96/374 | NT | 100% | intergenic (‑286/‑33) | yjcS/Y75_RS21310 | alkyl sulfatase YjcS/IS5‑like element IS5 family transposase |
| ? | NC_007779 | 4311562 = | 0 (0.000) | pseudogene (916/921 nt) | alsK | allose kinase | |||||