mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | ||||||
|---|---|---|---|---|---|---|
| evidence | position | mutation | freq | annotation | gene | description |
| RA | 5,439 | A→C | 18.5% | H69P (CAC→CCC) | Y75_RS00030 → | DUF2502 domain‑containing protein |
| RA | 75,091 | G→T | 14.3% | D130E (GAC→GAA) | thiB ← | thiamine ABC transporter substrate binding subunit |
| RA | 99,078 | A→T | 10.6% | I226F (ATC→TTC) | ftsW → | cell division protein FtsW |
| RA | 100,440 | T→G | 16.1% | V266G (GTG→GGG) | murG → | undecaprenyldiphospho‑muramoylpentapeptide beta‑N‑acetylglucosaminyltransferase |
| RA | 220,055 | C→A | 13.8% | intergenic (‑60/+58) | rcsF ← / ← metQ | Rcs stress response system protein RcsF/methionine ABC transporter substrate‑binding lipoprotein MetQ |
| RA | 228,688 | Δ1 bp | 100% | intergenic (+9/‑70) | Y75_RS01035 → / → rrf | 23S ribosomal RNA/5S ribosomal RNA |
| RA | 249,538 | T→G | 42.3% | H187P (CAC→CCC) | flhA ← | flagellar type III secretion system protein FlhA |
| RA | 249,540 | C→G | 13.2% | P186P (CCG→CCC) | flhA ← | flagellar type III secretion system protein FlhA |
| RA | 282,321 | T→C | 12.1% | S274P (TCC→CCC) | yagE → | 2‑keto‑3‑deoxygluconate aldolase |
| RA | 283,220 | T→G | 33.0% | W266G (TGG→GGG) | yagF → | xylonate dehydratase YagF |
| RA | 283,224 | T→G | 24.6% | L267R (CTG→CGG) | yagF → | xylonate dehydratase YagF |
| RA | 303,313 | T→G | 6.6% | T32P (ACT→CCT) | Y75_RS01490 ← | YkgJ family cysteine cluster protein |
| RA | 346,919 | G→C | 12.5% | T250R (ACG→AGG) | prpR ← | propionate catabolism operon regulatory protein PrpR |
| RA | 363,821 | T→C | 17.4% | D570G (GAC→GGC) | Y75_RS01770 ← | beta‑galactosidase |
| RA | 374,190 | A→G | 5.6% | intergenic (+85/‑493) | dmpG → / → Y75_RS01815 | 4‑hydroxy‑2‑oxovalerate aldolase/3‑(3‑hydroxy‑phenyl)propionate transporter |
| RA | 374,196 | T→C | 10.4% | intergenic (+91/‑487) | dmpG → / → Y75_RS01815 | 4‑hydroxy‑2‑oxovalerate aldolase/3‑(3‑hydroxy‑phenyl)propionate transporter |
| RA | 374,198 | A→G | 5.0% | intergenic (+93/‑485) | dmpG → / → Y75_RS01815 | 4‑hydroxy‑2‑oxovalerate aldolase/3‑(3‑hydroxy‑phenyl)propionate transporter |
| RA | 374,210 | T→C | 9.2% | intergenic (+105/‑473) | dmpG → / → Y75_RS01815 | 4‑hydroxy‑2‑oxovalerate aldolase/3‑(3‑hydroxy‑phenyl)propionate transporter |
| RA | 374,299 | G→A | 6.1% | intergenic (+194/‑384) | dmpG → / → Y75_RS01815 | 4‑hydroxy‑2‑oxovalerate aldolase/3‑(3‑hydroxy‑phenyl)propionate transporter |
| RA | 374,344 | Δ1 bp | 7.6% | intergenic (+239/‑339) | dmpG → / → Y75_RS01815 | 4‑hydroxy‑2‑oxovalerate aldolase/3‑(3‑hydroxy‑phenyl)propionate transporter |
| RA | 374,345 | T→G | 7.9% | intergenic (+240/‑338) | dmpG → / → Y75_RS01815 | 4‑hydroxy‑2‑oxovalerate aldolase/3‑(3‑hydroxy‑phenyl)propionate transporter |
| RA | 374,400 | A→G | 7.7% | intergenic (+295/‑283) | dmpG → / → Y75_RS01815 | 4‑hydroxy‑2‑oxovalerate aldolase/3‑(3‑hydroxy‑phenyl)propionate transporter |
| RA | 376,698 | C→T | 7.0% | intergenic (+163/+61) | Y75_RS01820 → / ← Y75_RS01825 | DUF2058 domain‑containing protein/S‑formylglutathione hydrolase |
| RA | 376,702 | C→T | 6.1% | intergenic (+167/+57) | Y75_RS01820 → / ← Y75_RS01825 | DUF2058 domain‑containing protein/S‑formylglutathione hydrolase |
| RA | 380,685 | G→A | 14.4% | R52R (CGG→CGA) | Y75_RS01860 → | IS3‑like element IS2 family transposase |
| RA | 380,686 | C→T | 14.4% | Q53* (CAA→TAA) | Y75_RS01860 → | IS3‑like element IS2 family transposase |
| RA | 416,757 | T→G | 11.3% | V131G (GTG→GGG) | phoB → | phosphate response regulator transcription factor PhoB |
| RA | 432,865 | G→A | 20.5% | A63T (GCC→ACC) ‡ | ribD → | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase RibD |
| RA | 432,867 | C→A | 17.7% | A63A (GCC→GCA) ‡ | ribD → | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase RibD |
| RA | 432,873 | T→G | 30.0% | G65G (GGT→GGG) | ribD → | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase RibD |
| RA | 443,039 | A→C | 7.8% | V234G (GTG→GGG) | panE ← | 2‑dehydropantoate 2‑reductase |
| RA | 449,556 | T→A | 10.8% | T104S (ACC→TCC) | cyoB ← | cytochrome o ubiquinol oxidase subunit I |
| RA | 451,771 | G→C | 12.7% | G333G (GGC→GGG) | ampG ← | muropeptide MFS transporter AmpG |
| RA | 474,216 | A→C | 17.5% | V57G (GTA→GGA) | tesB ← | acyl‑CoA thioesterase II |
| RA | 484,769 | A→C | 8.1% | C25W (TGT→TGG) | acrA ← | multidrug efflux RND transporter periplasmic adaptor subunit AcrA |
| RA | 539,801 | G→T | 22.5% | A5S (GCA→TCA) | Y75_RS02625 → | uracil/xanthine transporter |
| RA | 547,694 | A→G | 100% | E38E (GAA→GAG) | Y75_RS02655 → | hypothetical protein |
| RA | 547,831:1 | +G | 100% | coding (251/261 nt) | Y75_RS02655 → | hypothetical protein |
| RA | 556,858 | A→T | 100% | L36Q (CTG→CAG) | folD ← | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD |
| RA | 646,433 | A→C | 24.1% | G100G (GGT→GGG) | citG ← | triphosphoribosyl‑dephospho‑CoA synthase CitG |
| RA | 650,499 | T→A | 27.3% | D194V (GAT→GTT) | citC ← | [citrate (pro‑3S)‑lyase] ligase |
| MC JC | 654,214 | Δ1,199 bp | 100% | Y75_RS03225–[dcuC] | Y75_RS03225, [dcuC] | |
| RA | 693,319 | T→C | 12.9% | E174G (GAG→GGG) | Y75_RS03425 ← | PhoH family protein |
| RA | 705,003 | A→C | 14.3% | H213P (CAC→CCC) | nagE → | PTS N‑acetyl glucosamine transporter subunit IIABC |
| RA | 735,187 | T→G | 15.3% | pseudogene (618/1506 nt) | Y75_RS03635 → | RHS repeat protein |
| RA | 735,211 | T→G | 13.5% | pseudogene (642/1506 nt) | Y75_RS03635 → | RHS repeat protein |
| RA | 812,143 | T→G | 28.3% | V67G (GTG→GGG) | bioC → | malonyl‑ACP O‑methyltransferase BioC |
| RA | 812,160 | T→C | 14.9% | S73P (TCG→CCG) | bioC → | malonyl‑ACP O‑methyltransferase BioC |
| RA | 816,246 | A→C | 16.5% | V275G (GTA→GGA) | yvcK ← | uridine diphosphate‑N‑acetylglucosamine‑binding protein YvcK |
| RA | 837,233 | A→C | 11.0% | H154P (CAC→CCC) | Y75_RS04175 → | hydroxycarboxylate dehydrogenase HcXB |
| RA | 864,182 | A→G | 9.3% | D40G (GAT→GGT) | fsa → | fructose‑6‑phosphate aldolase |
| RA | 864,293 | C→T | 7.3% | S77F (TCT→TTT) | fsa → | fructose‑6‑phosphate aldolase |
| RA | 894,943 | T→G | 11.8% | G246G (GGT→GGG) | potF → | spermidine/putrescine ABC transporter substrate‑binding protein PotF |
| RA | 914,459 | T→C | 8.0% | D274G (GAT→GGT) | lysO ← | L‑lysine exporter LysO |
| RA | 926,322 | A→G | 9.3% | noncoding (72/88 nt) | Y75_RS04600 ← | tRNA‑Ser |
| RA | 954,782 | T→A | 9.4% | Y36F (TAT→TTT) | focA ← | formate transporter FocA |
| RA | 954,788 | G→T | 10.7% | T34N (ACT→AAT) | focA ← | formate transporter FocA |
| RA | 954,805 | C→T | 11.7% | T28T (ACG→ACA) | focA ← | formate transporter FocA |
| RA | 954,817 | G→A | 12.9% | V24V (GTC→GTT) | focA ← | formate transporter FocA |
| RA | 969,339 | A→G | 15.9% | R184R (CGA→CGG) | lpxK → | tetraacyldisaccharide 4'‑kinase |
| RA | 990,367 | A→G | 18.2% | S138P (TCA→CCA) | pncB ← | nicotinate phosphoribosyltransferase |
| RA | 1,065,700 | C→T | 100% | R415C (CGT→TGT) | Y75_RS05220 → | YccE family protein |
| RA | 1,093,686 | T→C | 100% | V130A (GTA→GCA) | Y75_RS05355 → | GGDEF domain‑containing protein |
| RA | 1,176,404 | T→G | 9.7% | A113A (GCA→GCC) | Y75_RS05830 ← | acyltransferase family protein |
| RA | 1,243,025 | T→A | 8.1% | L208F (TTA→TTT) | Y75_RS06230 ← | potassium/proton antiporter |
| RA | 1,266,354 | T→G | 13.5% | V355G (GTT→GGT) | hemA → | glutamyl‑tRNA reductase |
| RA | 1,288,265 | T→G | 7.2% | intergenic (+162/+22) | narI → / ← Y75_RS06440 | respiratory nitrate reductase subunit gamma/RtT sRNA |
| RA | 1,303,712 | A→G | 100% | S273G (AGC→GGC) | oppA → | oligopeptide ABC transporter substrate‑binding protein OppA |
| RA | 1,321,828 | A→C | 11.7% | V424G (GTT→GGT) | trpD ← | bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD |
| RA | 1,378,769 | T→G | 10.3% | V75G (GTG→GGG) | Y75_RS06935 → | Gfo/Idh/MocA family oxidoreductase |
| MC JC | 1,413,639 | Δ23,060 bp | 100% | [ttcA]–Y75_RS24865 | 33 genes [ttcA], Y75_RS23540, xisR, rcbA, ralR, recT, recE, Y75_RS07140, Y75_RS07145, kilR, Y75_RS07155, Y75_RS07160, racR, ydaS, Y75_RS07175, Y75_RS07180, Y75_RS07185, Y75_RS07190, rzoD, Y75_RS07200, Y75_RS07205, Y75_RS07210, Y75_RS07215, Y75_RS07220, Y75_RS07225, Y75_RS07230, Y75_RS07235, Y75_RS23570, Y75_RS07255, Y75_RS07260, ydfK, Y75_RS24860, Y75_RS24865 |
|
| RA | 1,514,709 | C→T | 13.6% | A60V (GCT→GTT) | Y75_RS07615 → | ABC transporter ATP‑binding protein |
| RA | 1,521,798 | G→A | 10.6% | intergenic (+20/‑178) | curA → / → Y75_RS07665 | NADPH‑dependent curcumin/dihydrocurcumin reductase/DNA‑binding transcriptional regulator McbR |
| RA | 1,530,997 | A→G | 9.9% | E382G (GAG→GGG) | Y75_RS07695 → | RHS repeat protein |
| RA | 1,543,668 | T→G | 9.3% | T213P (ACC→CCC) | Y75_RS07750 ← | nitrate reductase Z subunit alpha |
| RA | 1,586,587 | A→C | 18.8% | R538R (CGT→CGG) | ydeP ← | acid resistance putative oxidoreductase YdeP |
| RA | 1,703,339 | A→G | 11.5% | G223G (GGA→GGG) | malY → | bifunctional maltose regulon transcriptional repressor/cystathionine beta‑lyase MalY |
| RA | 1,710,440 | T→G | 7.4% | L603R (CTG→CGG) | rsxC → | electron transport complex subunit RsxC |
| RA | 1,736,307 | C→A | 8.6% | T53T (ACC→ACA) | Y75_RS08715 → | peptidoglycan DD‑endopeptidase MepH |
| RA | 1,739,298 | A→G | 100% | intergenic (‑39/‑260) | ynhF ← / → purR | stress response protein YnhF/HTH‑type transcriptional repressor PurR |
| RA | 1,813,761 | A→G | 13.3% | I372V (ATT→GTT) | Y75_RS09105 → | cystine/sulfocysteine:cation symporter |
| RA | 1,862,379 | G→C | 10.5% | A223G (GCG→GGG) | Y75_RS09355 ← | zinc‑binding dehydrogenase |
| RA | 1,916,977 | A→T | 100% | L91Q (CTG→CAG) | proQ ← | RNA chaperone ProQ |
| RA | 1,923,759 | T→G | 11.0% | G3G (GGT→GGG) | Y75_RS09685 → | YebW family protein |
| RA | 1,930,726 | C→T | 7.4% | intergenic (‑173/+36) | ptrB ← / ← Y75_RS09735 | oligopeptidase B/tellurite resistance TerB family protein |
| RA | 2,010,498 | A→T | 17.8% | T29S (ACT→TCT) | yedE → | selenium metabolism membrane protein YedE/FdhT |
| RA | 2,042,280 | A→G | 24.8% | V222V (GTA→GTG) | msrP → | protein‑methionine‑sulfoxide reductase catalytic subunit MsrP |
| RA | 2,057,932 | G→C | 9.2% | A245A (GCG→GCC) | amn → | AMP nucleosidase |
| RA | 2,057,936 | G→A | 9.2% | E247K (GAA→AAA) | amn → | AMP nucleosidase |
| RA | 2,152,038 | G→C | 16.7% | A362G (GCG→GGG) | yegI ← | protein kinase YegI |
| RA | 2,153,826 | G→T | 35.5% | intergenic (+43/+22) | Y75_RS10870 → / ← pphC | YegJ family protein/protein‑serine/threonine phosphatase PphC |
| RA | 2,203,533 | C→G | 7.9% | pseudogene (3726/3796 nt) | Y75_RS24960 → | WGR and DUF4132 domain‑containing protein |
| RA | 2,219,275 | A→C | 10.7% | V179G (GTG→GGG) | yehW ← | glycine betaine ABC transporter permease YehW |
| RA | 2,231,588 | G→C | 20.9% | pseudogene (595/1526 nt) | mdtQ ← | multidrug resistance outer membrane protein MdtQ |
| RA | 2,306,099 | A→C | 12.0% | G83G (GGT→GGG) | napD ← | chaperone NapD |
| RA | 2,307,857 | G→C | 7.5% | intergenic (+130/+585) | eco → / ← mqo | serine protease inhibitor ecotin/malate dehydrogenase (quinone) |
| RA | 2,307,909 | G→A | 7.9% | intergenic (+182/+533) | eco → / ← mqo | serine protease inhibitor ecotin/malate dehydrogenase (quinone) |
| RA | 2,308,248 | A→G | 11.4% | intergenic (+521/+194) | eco → / ← mqo | serine protease inhibitor ecotin/malate dehydrogenase (quinone) |
| MC JC | 2,320,795 | Δ1,336 bp | 100% | Y75_RS11650–[rcsC] | Y75_RS11650, Y75_RS11650, [rcsC] | |
| RA | 2,345,442 | A→C | 20.8% | V1133G (GTG→GGG) | yfaL ← | AIDA‑I family autotransporter adhesin YfaL/EhaC |
| RA | 2,347,125 | G→T | 5.9% | T572K (ACA→AAA) | yfaL ← | AIDA‑I family autotransporter adhesin YfaL/EhaC |
| RA | 2,443,044 | G→A | 6.4% | S85F (TCC→TTC) | pdxB ← | 4‑phosphoerythronate dehydrogenase PdxB |
| RA | 2,510,112 | G→C | 7.1% | G294G (GGC→GGG) | ypdE ← | aminopeptidase |
| RA | 2,510,128 | T→G | 13.0% | H289P (CAC→CCC) | ypdE ← | aminopeptidase |
| RA | 2,547,919 | T→A | 10.5% | T14S (ACC→TCC) | cysT ← | sulfate/thiosulfate ABC transporter permease CysT |
| RA | 2,549,507 | A→C | 10.9% | V188G (GTG→GGG) | ucpA ← | SDR family oxidoreductase UcpA |
| RA | 2,556,867 | T→A | 7.5% | L102F (TTA→TTT) | Y75_RS12780 ← | DUF2919 domain‑containing protein |
| RA | 2,573,516 | A→C | 8.9% | C48W (TGT→TGG) | eutQ ← | ethanolamine utilization acetate kinase EutQ |
| RA | 2,573,524 | T→G | 15.2% | T46P (ACC→CCC) | eutQ ← | ethanolamine utilization acetate kinase EutQ |
| RA | 2,606,882 | T→G | 23.6% | V437G (GTA→GGA) | hyfF → | hydrogenase 4 subunit F |
| RA | 2,606,887 | A→G | 24.7% | M439V (ATG→GTG) | hyfF → | hydrogenase 4 subunit F |
| RA | 2,606,894 | C→G | 17.9% | A441G (GCG→GGG) | hyfF → | hydrogenase 4 subunit F |
| RA | 2,639,469 | T→C | 100% | E331G (GAA→GGA) | ispG ← | flavodoxin‑dependent (E)‑4‑hydroxy‑3‑methylbut‑2‑enyl‑diphosphate synthase |
| RA | 2,718,748 | T→G | 13.7% | V47G (GTG→GGG) | pat → | protein lysine acetyltransferase |
| RA | 2,775,211 | A→G | 18.8% | E57G (GAG→GGG) | Y75_RS13830 → | RadC family protein |
| RA | 2,792,331 | T→G | 9.7% | V314G (GTG→GGG) | Y75_RS13895 → | 4‑aminobutyrate‑‑2‑oxoglutarate transaminase |
| RA | 2,825,084 | T→G | 8.3% | W13G (TGG→GGG) | srlE → | PTS glucitol/sorbitol transporter subunit IIB |
| RA | 2,827,162 | T→G | 25.8% | V257G (GTG→GGG) | srlD → | sorbitol‑6‑phosphate dehydrogenase |
| RA | 2,827,203 | T→G | 12.5% | intergenic (+31/‑74) | srlD → / → gutM | sorbitol‑6‑phosphate dehydrogenase/transcriptional regulator GutM |
| RA | 2,846,726 | T→C | 11.4% | E391G (GAA→GGA) | hycC ← | formate hydrogenlyase subunit 3 |
| RA | 2,858,088 | C→G | 11.8% | G780G (GGC→GGG) | mutS → | DNA mismatch repair protein MutS |
| RA | 2,859,362 | T→C | 7.3% | S187G (AGT→GGT) | Y75_RS14265 ← | DeoR/GlpR transcriptional regulator |
| RA | 2,866,109 | C→A | 100% | pseudogene (99/993 nt) | rpoS ← | RNA polymerase sigma factor RpoS |
| RA | 2,873,959 | G→T | 10.4% | G39G (GGC→GGA) | cysN ← | sulfate adenylyltransferase subunit CysN |
| RA | 2,906,975 | C→G | 100% | D450H (GAC→CAC) | pyrG ← | CTP synthase (glutamine hydrolyzing) |
| MC JC | 2,910,136 | Δ12 bp | 100% | coding (2161‑2172/2235 nt) | Y75_RS14515 ← | GTP pyrophosphokinase |
| RA | 2,935,499 | T→C | 13.9% | S420S (TCT→TCC) | fucI → | L‑fucose isomerase |
| RA | 2,946,123 | A→C | 6.0% | intergenic (+4/‑30) | Y75_RS14670 → / → Y75_RS14675 | tRNA‑Met/tRNA‑Met |
| RA | 2,973,749 | T→G | 14.3% | T308P (ACT→CCT) | aas ← | bifunctional acyl‑ACP‑‑phospholipid O‑acyltransferase/long‑chain‑fatty‑acid‑‑ACP ligase |
| RA | 2,976,802 | G→C | 8.6% | R252G (CGT→GGT) | lysA ← | diaminopimelate decarboxylase |
| RA | 2,976,822 | T→A | 22.3% | Y245F (TAT→TTT) | lysA ← | diaminopimelate decarboxylase |
| RA | 3,114,018 | T→G | 6.7% | T1251P (ACC→CCC) | sslE ← | lipoprotein metalloprotease SslE |
| RA | 3,134,056 | G→T | 9.6% | G324G (GGC→GGA) | pitB ← | inorganic phosphate transporter PitB |
| RA | 3,138,919 | T→C | 14.4% | E19G (GAG→GGG) | hypA ← | hydrogenase maturation nickel metallochaperone HypA |
| RA | 3,198,608 | G→T | 11.9% | F338L (TTC→TTA) | Y75_RS15900 ← | inorganic triphosphatase |
| RA | 3,205,092 | C→A | 16.6% | intergenic (‑180/‑27) | ttdR ← / → ttdA | DNA‑binding transcriptional activator TtdR/L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,094 | G→A | 34.6% | intergenic (‑182/‑25) | ttdR ← / → ttdA | DNA‑binding transcriptional activator TtdR/L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,123 | T→G | 12.7% | M2R (ATG→AGG) | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,125 | A→G | 11.9% | S3G (AGC→GGC) ‡ | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,127 | C→G | 15.4% | S3R (AGC→AGG) ‡ | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,132 | G→A | 11.8% | S5N (AGT→AAT) ‡ | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,133 | T→A | 33.6% | S5R (AGT→AGA) ‡ | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,139 | G→A | 24.1% | K7K (AAG→AAA) | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,140 | C→A | 23.8% | Q8K (CAA→AAA) | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,143 | C→A | 24.4% | Q9K (CAG→AAG) | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,146 | G→A | 13.3% | A10T (GCA→ACA) ‡ | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,147 | C→A | 19.5% | A10E (GCA→GAA) ‡ | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,150 | T→A | 14.7% | V11E (GTG→GAG) | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,205,162 | C→A | 19.7% | T15K (ACA→AAA) | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,236,559 | T→G | 13.0% | V198G (GTG→GGG) | Y75_RS16075 → | Gfo/Idh/MocA family oxidoreductase |
| MC JC | 3,261,134 | Δ1,199 bp | 100% | Y75_RS16205–[tdcD] | Y75_RS16205, [tdcD] | |
| RA | 3,293,622 | C→G | 13.5% | A123G (GCG→GGG) | Y75_RS16365 → | penicillin‑binding protein activator LpoA |
| RA | 3,315,397 | A→C | 11.8% | V158G (GTG→GGG) | infB ← | translation initiation factor IF‑2 |
| RA | 3,375,420 | C→A | 16.3% | Q233K (CAA→AAA) | dcuC → | anaerobic C4‑dicarboxylate transporter DcuC |
| RA | 3,464,900 | T→C | 11.1% | intergenic (‑276/+27) | murB ← / ← rrf | UDP‑N‑acetylmuramate dehydrogenase/5S ribosomal RNA |
| RA | 3,464,914 | C→T | 17.6% | intergenic (‑290/+13) | murB ← / ← rrf | UDP‑N‑acetylmuramate dehydrogenase/5S ribosomal RNA |
| RA | 3,464,928 | C→T | 20.2% | noncoding (115/116 nt) | rrf ← | 5S ribosomal RNA |
| RA | 3,465,033 | T→G | 16.1% | noncoding (10/116 nt) | rrf ← | 5S ribosomal RNA |
| RA | 3,545,460 | C→G | 22.4% | V382V (GTC→GTG) | Y75_RS17610 → | PTS fructose‑like transporter subunit IIBC |
| RA | 3,632,207 | T→G | 13.0% | V75G (GTG→GGG) | Y75_RS18020 → | thioesterase family protein |
| RA | 3,645,110 | A→T | 100% | L140Q (CTG→CAG) | cyaA ← | class I adenylate cyclase |
| RA | 3,656,455 | C→T | 100% | V91I (GTT→ATT) | rffM ← | lipopolysaccharide N‑acetylmannosaminouronosyltransferase |
| RA | 3,660,567 | C→G | 13.0% | P323P (CCG→CCC) | rffA ← | dTDP‑4‑amino‑4,6‑dideoxygalactose transaminase |
| RA | 3,680,725 | A→C | 12.0% | V209G (GTG→GGG) | ilvA ← | threonine ammonia‑lyase, biosynthetic |
| RA | 3,741,125 | A→G | 23.0% | M352V (ATG→GTG) | Y75_RS18545 → | adenine permease AdeP |
| MC JC | 3,742,936 | Δ1,336 bp | 100% | Y75_RS18560–Y75_RS18560 | Y75_RS18560, Y75_RS18560 | |
| RA | 3,777,738 | C→G | 59.1% | G309G (GGC→GGG) | Y75_RS18735 → | PTS transporter subunit EIIC |
| RA | 3,777,741 | G→T | 20.2% | L310F (TTG→TTT) | Y75_RS18735 → | PTS transporter subunit EIIC |
| RA | 3,777,745 | A→T | 39.7% | I312F (ATT→TTT) | Y75_RS18735 → | PTS transporter subunit EIIC |
| RA | 3,777,754 | A→C | 38.6% | T315P (ACC→CCC) | Y75_RS18735 → | PTS transporter subunit EIIC |
| RA | 3,790,177 | C→G | 12.0% | G163G (GGC→GGG) | uhpA → | transcriptional regulator UhpA |
| RA | 3,824,915 | A→C | 10.4% | D90A (GAC→GCC) | pyrE → | orotate phosphoribosyltransferase |
| RA | 3,827,131 | T→G | 25.4% | D185A (GAC→GCC) | coaBC ← | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate‑‑cysteine ligase CoaBC |
| RA | 3,858,404 | T→G | 17.2% | G184G (GGT→GGG) | cysE → | serine O‑acetyltransferase |
| RA | 3,858,449 | T→G | 16.7% | G199G (GGT→GGG) | cysE → | serine O‑acetyltransferase |
| RA | 3,858,461 | C→G | 11.3% | G203G (GGC→GGG) | cysE → | serine O‑acetyltransferase |
| RA | 3,859,519 | A→C | 11.3% | V357G (GTG→GGG) | lldD ← | quinone‑dependent L‑lactate dehydrogenase |
| RA | 3,874,921 | A→C | 13.3% | S1104R (AGT→AGG) | Y75_RS19225 ← | RHS element protein RhsA |
| RA | 3,880,033 | A→G | 27.4% | S290G (AGT→GGT) | selA → | L‑seryl‑tRNA(Sec) selenium transferase |
| RA | 3,880,047 | C→A | 15.7% | D294E (GAC→GAA) | selA → | L‑seryl‑tRNA(Sec) selenium transferase |
| RA | 3,894,906 | T→A | 22.6% | T236S (ACC→TCC) | yiaN ← | 2,3‑diketo‑L‑gulonate transporter large permease YiaN |
| RA | 3,895,402 | A→C | 26.2% | N70K (AAT→AAG) | yiaN ← | 2,3‑diketo‑L‑gulonate transporter large permease YiaN |
| RA | 3,923,939 | G→T | 9.7% | intergenic (‑71/‑82) | Y75_RS19450 ← / → Y75_RS19455 | OmpA family lipoprotein/biotin sulfoxide reductase |
| RA | 3,960,509 | A→C | 5.8% | V163G (GTG→GGG) | Y75_RS19605 ← | 2‑dehydro‑3‑deoxygluconokinase |
| RA | 3,994,332 | A→C | 14.3% | R233R (CGT→CGG) | Y75_RS19765 ← | 23S rRNA (adenine(2030)‑N(6))‑methyltransferase |
| RA | 4,017,912 | A→C | 13.8% | S1104R (AGT→AGG) | Y75_RS19860 ← | rhs element protein RhsB |
| RA | 4,017,958 | A→C | 13.9% | V1089G (GTG→GGG) | Y75_RS19860 ← | rhs element protein RhsB |
| RA | 4,024,550 | T→G | 19.3% | T209P (ACC→CCC) | nikB ← | nickel ABC transporter permease subunit NikB |
| RA | 4,044,501 | A→T | 8.5% | T164S (ACC→TCC) | livH → | high‑affinity branched‑chain amino acid ABC transporter permease LivH |
| RA | 4,091,479 | C→G | 16.9% | G378G (GGC→GGG) | malQ → | 4‑alpha‑glucanotransferase |
| RA | 4,091,484 | C→G | 9.6% | A380G (GCG→GGG) | malQ → | 4‑alpha‑glucanotransferase |
| RA | 4,091,507 | T→G | 19.6% | C388G (TGT→GGT) | malQ → | 4‑alpha‑glucanotransferase |
| RA | 4,091,562 | T→C | 15.4% | L406P (CTC→CCC) | malQ → | 4‑alpha‑glucanotransferase |
| RA | 4,104,246 | G→T | 11.5% | A139S (GCT→TCT) | ompR → | two‑component system response regulator OmpR |
| RA | 4,104,263 | A→C | 11.1% | K144N (AAA→AAC) | ompR → | two‑component system response regulator OmpR |
| RA | 4,160,444 | C→G | 7.7% | G212G (GGC→GGG) | kefB → | glutathione‑regulated potassium‑efflux system protein KefB |
| RA | 4,198,966 | T→G | 100% | Y76D (TAC→GAC) | rpsD → | 30S ribosomal protein S4 |
| RA | 4,231,754 | A→G | 14.5% | E145G (GAG→GGG) | Y75_RS20955 → | Na/Pi cotransporter family protein |
| RA | 4,245,517 | T→A | 15.9% | T110S (ACC→TCC) | Y75_RS21020 ← | D‑xylose transporter XylE |
| RA | 4,248,114 | A→C | 6.8% | S184R (AGT→AGG) | malF ← | maltose ABC transporter permease MalF |
| RA | 4,259,524 | T→C | 11.5% | D178G (GAT→GGT) | plsB ← | glycerol‑3‑phosphate 1‑O‑acyltransferase PlsB |
| RA | 4,299,632 | C→T | 5.8% | intergenic (+248/+283) | gltP → / ← Y75_RS21270 | glutamate/aspartate:proton symporter GltP/sel1 repeat family protein |
| RA | 4,318,228 | T→G | 10.0% | G67G (GGT→GGG) | rpiB → | bifunctional allose‑6‑phosphate isomerase/ribose‑5‑phosphate isomerase RpiB |
| RA | 4,322,862 | T→C | 11.5% | E194G (GAG→GGG) | phnK ← | phosphonate C‑P lyase system protein PhnK |
| RA | 4,322,904 | A→C | 12.9% | V180G (GTG→GGG) | phnK ← | phosphonate C‑P lyase system protein PhnK |
| RA | 4,341,575 | T→C | 11.3% | G45G (GGA→GGG) | adiC ← | arginine/agmatine antiporter |
| RA | 4,371,271 | Δ2 bp | 100% | pseudogene (182‑183/1304 nt) | Y75_RS21600 ← | anaerobic C4‑dicarboxylate transporter |
| RA | 4,417,892 | A→G | 9.8% | E62G (GAG→GGG) | Y75_RS21850 → | glutathionylspermidine synthase family protein |
| RA | 4,435,025 | A→G | 11.9% | E161G (GAG→GGG) | cycA → | D‑serine/D‑alanine/glycine transporter |
| RA | 4,436,524 | T→C | 11.3% | D47G (GAT→GGT) | ytfE ← | iron‑sulfur cluster repair protein YtfE |
| RA | 4,463,104 | A→C | 13.2% | T156P (ACC→CCC) | pmbA → | metalloprotease PmbA |
| RA | 4,470,352 | T→G | 11.8% | Y170S (TAC→TCC) | treB ← | PTS trehalose transporter subunit IIBC |
| RA | 4,492,872 | C→G | 16.1% | A292G (GCG→GGG) | lptG → | LPS export ABC transporter permease LptG |
| RA | 4,516,211 | T→C | 9.9% | E295G (GAG→GGG) | fecD ← | Fe(3+) dicitrate ABC transporter permease subunit FecD |
| RA | 4,575,860 | A→C | 23.7% | V132G (GTG→GGG) | Y75_RS22690 ← | PLP‑dependent aminotransferase family protein |
| RA | 4,599,187 | C→A | 9.0% | L72F (TTG→TTT) | Y75_RS22770 ← | MFS transporter |
| RA | 4,609,032 | G→T | 10.1% | A65S (GCC→TCC) | bglJ → | DNA‑binding transcriptional activator BglJ |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_007779 | 1301041–1302369 | 1302407 | 39–1367 | 247 [0] | [0] 213 | Y75_RS06530–Y75_RS06530 | Y75_RS06530,Y75_RS06530 |
| * | * | ÷ | NC_007779 | 1397873–1398951 | 1406267 | 7317–8395 | 52 [50] | [0] 115 | [Y75_RS07025]–[Y75_RS07065] | [Y75_RS07025],Y75_RS07030,uspE,Y75_RS07040,ogt,abgT,Y75_RS07060,[Y75_RS07065] |
| * | * | ÷ | NC_007779 | 3423331–3423368 | 3424333–3423517 | 150–1003 | 51 [50] | [49] 51 | [rrf]–[Y75_RS17030] | [rrf],Y75_RS17020,rrf,[Y75_RS17030] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 115788 | 80 (0.430) | 11 (0.060) | 7/388 | NT | 11.7% | coding (1312/1386 nt) | gspE | type II secretion system protein GspE |
| ? | NC_007779 | = 115953 | 89 (0.490) | coding (1147/1386 nt) | gspE | type II secretion system protein GspE | |||||
| * | ? | NC_007779 | = 224149 | NA (NA) | 4 (0.020) | 4/392 | NT | NA | noncoding (379/1554 nt) | Y75_RS01020 | 16S ribosomal RNA |
| ? | NC_007779 | = 224607 | NA (NA) | noncoding (837/1554 nt) | Y75_RS01020 | 16S ribosomal RNA | |||||
| * | ? | NC_007779 | 224412 = | NA (NA) | 9 (0.050) | 9/386 | NT | NA | noncoding (642/1554 nt) | Y75_RS01020 | 16S ribosomal RNA |
| ? | NC_007779 | 224936 = | NA (NA) | noncoding (1166/1554 nt) | Y75_RS01020 | 16S ribosomal RNA | |||||
| * | ? | NC_007779 | = 243009 | 174 (0.930) | 40 (0.220) | 15/386 | NT | 16.7% | coding (295/2445 nt) | Y75_RS01130 | acyl‑CoA dehydrogenase FadE |
| ? | NC_007779 | = 243192 | 231 (1.280) | coding (112/2445 nt) | Y75_RS01130 | acyl‑CoA dehydrogenase FadE | |||||
| * | ? | NC_007779 | 273180 = | NA (NA) | 210 (1.120) | 116/398 | NT | 100% | intergenic (+3/+145) | Y75_RS01330/Y75_RS01335 | hypothetical protein/IS5‑like element IS5 family transposase |
| ? | NC_007779 | 701988 = | 0 (0.000) | coding (29/1221 nt) | nagC | DNA‑binding transcriptional regulator NagC | |||||
| * | ? | NC_007779 | 314625 = | NA (NA) | 31 (0.180) | 17/374 | NT | NA | coding (111/300 nt) | Y75_RS24740 | transposase |
| ? | NC_007779 | 314851 = | NA (NA) | coding (41/867 nt) | Y75_RS01555 | IS3 family transposase | |||||
| * | ? | NC_007779 | 339194 = | 101 (0.540) | 10 (0.060) | 5/386 | NT | 6.8% | coding (178/297 nt) | Y75_RS01665 | hypothetical protein |
| ? | NC_007779 | 339317 = | 176 (0.970) | intergenic (+4/‑72) | Y75_RS01665/Y75_RS01670 | hypothetical protein/carbamate kinase family protein | |||||
| * | ? | NC_007779 | = 358460 | 179 (0.950) | 20 (0.120) | 9/370 | NT | 12.0% | coding (438/660 nt) | Y75_RS01745 | carbonic anhydrase CynT |
| ? | NC_007779 | = 358588 | 127 (0.730) | coding (566/660 nt) | Y75_RS01745 | carbonic anhydrase CynT | |||||
| * | ? | NC_007779 | 374146 = | 157 (0.840) | 21 (0.120) | 14/384 | NT | 10.8% | intergenic (+41/‑537) | dmpG/Y75_RS01815 | 4‑hydroxy‑2‑oxovalerate aldolase/3‑(3‑hydroxy‑phenyl)propionate transporter |
| ? | NC_007779 | 376553 = | 195 (1.080) | intergenic (+18/+206) | Y75_RS01820/Y75_RS01825 | DUF2058 domain‑containing protein/S‑formylglutathione hydrolase | |||||
| * | ? | NC_007779 | = 374187 | 166 (0.880) | 9 (0.060) | 5/314 | NT | 6.0% | intergenic (+82/‑496) | dmpG/Y75_RS01815 | 4‑hydroxy‑2‑oxovalerate aldolase/3‑(3‑hydroxy‑phenyl)propionate transporter |
| ? | NC_007779 | = 376711 | 153 (1.040) | intergenic (+176/+48) | Y75_RS01820/Y75_RS01825 | DUF2058 domain‑containing protein/S‑formylglutathione hydrolase | |||||
| * | ? | NC_007779 | = 374384 | 104 (0.550) | 17 (0.090) +T |
9/398 | NT | 11.6% | intergenic (+279/‑299) | dmpG/Y75_RS01815 | 4‑hydroxy‑2‑oxovalerate aldolase/3‑(3‑hydroxy‑phenyl)propionate transporter |
| ? | NC_007779 | = 376715 | 157 (0.840) | intergenic (+180/+44) | Y75_RS01820/Y75_RS01825 | DUF2058 domain‑containing protein/S‑formylglutathione hydrolase | |||||
| * | ? | NC_007779 | 379189 = | 103 (0.550) | 8 (0.040) | 6/390 | NT | 5.5% | intergenic (‑84/+104) | frmR/yaiO | formaldehyde‑responsive transcriptional repressor FrmR/YaiO family outer membrane beta‑barrel protein |
| ? | NC_007779 | 380077 = | 175 (0.960) | coding (435/444 nt) | Y75_RS01845 | transferase | |||||
| * | ? | NC_007779 | 380516 = | NA (NA) | 8 (0.040) | 7/382 | NT | NA | intergenic (‑5/‑14) | Y75_RS01845/Y75_RS01860 | transferase/IS3‑like element IS2 family transposase |
| ? | NC_007779 | 380536 = | NA (NA) | coding (7/361 nt) | Y75_RS01860 | IS3‑like element IS2 family transposase | |||||
| * | ? | NC_007779 | = 380599 | 53 (0.280) | 8 (0.040) | 7/386 | NT | 13.5% | coding (70/361 nt) | Y75_RS01860 | IS3‑like element IS2 family transposase |
| ? | NC_007779 | = 380956 | NA (NA) | coding (67/914 nt) | Y75_RS01860 | IS3‑like element IS2 family transposase | |||||
| * | ? | NC_007779 | = 380697 | 6 (0.030) | 29 (0.160) | 5/378 | NT | 83.6% | coding (168/361 nt) | Y75_RS01860 | IS3‑like element IS2 family transposase |
| ? | NC_007779 | = 381063 | NA (NA) | coding (174/914 nt) | Y75_RS01860 | IS3‑like element IS2 family transposase | |||||
| * | ? | NC_007779 | 380905 = | NA (NA) | 9 (0.050) | 4/382 | NT | NA | coding (16/914 nt) | Y75_RS01860 | IS3‑like element IS2 family transposase |
| ? | NC_007779 | 380977 = | NA (NA) | coding (88/914 nt) | Y75_RS01860 | IS3‑like element IS2 family transposase | |||||
| * | ? | NC_007779 | = 380913 | NA (NA) | 7 (0.040) | 5/382 | NT | NA | coding (24/914 nt) | Y75_RS01860 | IS3‑like element IS2 family transposase |
| ? | NC_007779 | = 380967 | NA (NA) | coding (78/914 nt) | Y75_RS01860 | IS3‑like element IS2 family transposase | |||||
| * | ? | NC_007779 | 391803 = | NA (NA) | 8 (0.050) | 8/374 | NT | 17.6% | coding (27/867 nt) | Y75_RS01905 | IS3 family transposase |
| ? | NC_007779 | 392003 = | 40 (0.210) | coding (123/300 nt) | Y75_RS24760 | transposase | |||||
| * | ? | NC_007779 | 398472 = | 226 (1.200) | 20 (0.110) | 9/382 | NT | 9.4% | coding (86/309 nt) | Y75_RS01945 | DUF2755 family protein |
| ? | NC_007779 | 398864 = | 168 (0.940) | coding (48/213 nt) | Y75_RS24765 | DUF2754 domain‑containing protein | |||||
| * | ? | NC_007779 | 607256 = | NA (NA) | 10 (0.060) | 6/348 | NT | 6.9% | intergenic (+45/‑32) | Y75_RS03010/Y75_RS03015 | type I toxin‑antitoxin system toxin HokE/IS4‑like element IS421 family transposase |
| ? | NC_007779 | 608549 = | 156 (0.830) | intergenic (+149/+133) | Y75_RS03015/entD | IS4‑like element IS421 family transposase/enterobactin synthase subunit EntD | |||||
| * | ? | NC_007779 | = 689467 | NA (NA) | 142 (0.760) | 82/400 | NT | 100% | intergenic (‑32/+298) | Y75_RS03405/lnt | IS5‑like element IS5 family transposase/apolipoprotein N‑acyltransferase |
| ? | NC_007779 | = 701992 | 0 (0.000) | coding (25/1221 nt) | nagC | DNA‑binding transcriptional regulator NagC | |||||
| * | ? | NC_007779 | = 701798 | 158 (0.840) | 7 (0.040) | 7/380 | NT | 7.5% | coding (219/1221 nt) | nagC | DNA‑binding transcriptional regulator NagC |
| ? | NC_007779 | = 701949 | 23 (0.130) | coding (68/1221 nt) | nagC | DNA‑binding transcriptional regulator NagC | |||||
| * | ? | NC_007779 | 802543 = | 67 (0.360) | 6 (0.030) | 5/382 | NT | 6.4% | coding (235/1434 nt) | Y75_RS04020 | anion permease |
| ? | NC_007779 | 803305 = | 112 (0.630) | coding (997/1434 nt) | Y75_RS04020 | anion permease | |||||
| * | ? | NC_007779 | = 819189 | 249 (1.330) | 15 (0.080) | 9/380 | NT | 6.6% | coding (198/486 nt) | moaC | cyclic pyranopterin monophosphate synthase MoaC |
| ? | NC_007779 | = 819297 | 186 (1.040) | coding (306/486 nt) | moaC | cyclic pyranopterin monophosphate synthase MoaC | |||||
| * | ? | NC_007779 | 900096 = | 235 (1.250) | 22 (0.120) | 7/384 | NT | 8.1% | intergenic (+29/+170) | rlmC/Y75_RS04480 | 23S rRNA (uracil(747)‑C(5))‑methyltransferase RlmC/arginine ABC transporter substrate‑binding protein |
| ? | NC_007779 | 900232 = | 274 (1.520) | intergenic (+165/+34) | rlmC/Y75_RS04480 | 23S rRNA (uracil(747)‑C(5))‑methyltransferase RlmC/arginine ABC transporter substrate‑binding protein | |||||
| * | ? | NC_007779 | = 1161914 | 137 (0.730) | 9 (0.050) | 6/384 | NT | 5.3% | coding (1215/2190 nt) | fhuE | ferric‑rhodotorulic acid/ferric‑coprogen receptor FhuE |
| ? | NC_007779 | = 1162170 | 187 (1.040) | coding (959/2190 nt) | fhuE | ferric‑rhodotorulic acid/ferric‑coprogen receptor FhuE | |||||
| * | ? | NC_007779 | 1209367 = | 84 (0.450) | 98 (0.570) | 71/368 | NT | 58.5% | coding (290/630 nt) | Y75_RS06020 | hypothetical protein |
| ? | NC_007779 | 1211196 = | 62 (0.360) | intergenic (‑6/‑66) | Y75_RS06035/pinE | tail fiber protein/site‑specific DNA recombinase | |||||
| * | ? | NC_007779 | = 1209382 | 83 (0.440) | 102 (0.590) | 67/368 | NT | 59.6% | coding (305/630 nt) | Y75_RS06020 | hypothetical protein |
| ? | NC_007779 | = 1211179 | 62 (0.360) | coding (12/495 nt) | Y75_RS06035 | tail fiber protein | |||||
| * | ? | NC_007779 | = 1244171 | 152 (0.810) | 10 (0.060) | 10/364 | NT | 6.7% | coding (487/915 nt) | ldcA | muramoyltetrapeptide carboxypeptidase |
| ? | NC_007779 | = 1244153 | 141 (0.830) | coding (505/915 nt) | ldcA | muramoyltetrapeptide carboxypeptidase | |||||
| * | ? | NC_007779 | 1294773 = | 0 (0.000) | 304 (1.620) | 131/400 | NT | 100% | intergenic (‑274/‑331) | hns/tdk | DNA‑binding transcriptional regulator H‑NS/thymidine kinase |
| ? | NC_007779 | = 1398952 | NA (NA) | intergenic (+146/‑127) | Y75_RS07025/Y75_RS07030 | IS5‑like element IS5 family transposase/DUF2534 family protein | |||||
| * | ? | NC_007779 | = 1294776 | 0 (0.000) | 222 (1.180) | 104/400 | NT | 100% | intergenic (‑277/‑328) | hns/tdk | DNA‑binding transcriptional regulator H‑NS/thymidine kinase |
| ? | NC_007779 | 1397758 = | NA (NA) | intergenic (‑122/‑32) | ynaI/Y75_RS07025 | low conductance mechanosensitive channel YnaI/IS5‑like element IS5 family transposase | |||||
| * | ? | NC_007779 | = 1301040 | 0 (0.000) | 194 (1.200) +28 bp |
95/344 | NT | 100% | intergenic (+218/‑45) | ychE/Y75_RS06530 | NAAT family transporter YchE/IS3‑like element IS2 family transposase |
| ? | NC_007779 | = 4311564 | NA (NA) | pseudogene (914/921 nt) | alsK | allose kinase | |||||
| * | ? | NC_007779 | 1302408 = | 0 (0.000) | 193 (1.030) | 107/400 | NT | 100% | intergenic (+50/‑488) | Y75_RS06530/oppA | IS3‑like element IS2 family transposase/oligopeptide ABC transporter substrate‑binding protein OppA |
| ? | NC_007779 | 1397758 = | NA (NA) | intergenic (‑122/‑32) | ynaI/Y75_RS07025 | low conductance mechanosensitive channel YnaI/IS5‑like element IS5 family transposase | |||||
| * | ? | NC_007779 | = 1388812 | 168 (0.900) | 45 (0.250) | 10/388 | NT | 22.4% | coding (379/1542 nt) | tyrR | transcriptional regulator TyrR |
| ? | NC_007779 | = 1388962 | 148 (0.810) | coding (529/1542 nt) | tyrR | transcriptional regulator TyrR | |||||
| * | ? | NC_007779 | 1406268 = | 0 (0.000) | 110 (0.590) | 81/400 | NT | 100% | coding (12/1311 nt) | Y75_RS07065 | p‑aminobenzoyl‑glutamate hydrolase subunit AbgA |
| ? | NC_007779 | 1980209 = | NA (NA) | intergenic (‑298/+146) | flhD/Y75_RS09980 | flagellar transcriptional regulator FlhD/IS5‑like element IS5 family transposase | |||||
| * | ? | NC_007779 | 1514677 = | 114 (0.610) | 8 (0.040) | 8/380 | NT | 7.5% | coding (147/1014 nt) | Y75_RS07615 | ABC transporter ATP‑binding protein |
| ? | NC_007779 | 1514742 = | 90 (0.510) | coding (212/1014 nt) | Y75_RS07615 | ABC transporter ATP‑binding protein | |||||
| * | ? | NC_007779 | = 1805805 | 207 (1.100) | 12 (0.070) | 5/380 | NT | 5.5% | pseudogene (998/1900 nt) | Y75_RS09060 | ShET2/EspL2 family type III secretion system effector toxin |
| ? | NC_007779 | = 1805989 | 213 (1.200) | pseudogene (1182/1900 nt) | Y75_RS09060 | ShET2/EspL2 family type III secretion system effector toxin | |||||
| * | ? | NC_007779 | 2034812 = | 119 (0.630) | 9 (0.050) | 7/380 | NT | 8.1% | coding (405/696 nt) | Y75_RS10315 | phosphohydrolase |
| ? | NC_007779 | 2034882 = | 91 (0.510) | coding (335/696 nt) | Y75_RS10315 | phosphohydrolase | |||||
| * | ? | NC_007779 | 2052854 = | 139 (0.740) | 17 (0.090) | 7/388 | NT | 10.8% | coding (5780/7077 nt) | yeeJ | inverse autotransporter adhesin YeeJ |
| ? | NC_007779 | 2052969 = | 146 (0.800) | coding (5895/7077 nt) | yeeJ | inverse autotransporter adhesin YeeJ | |||||
| * | ? | NC_007779 | 2060160 = | 124 (0.660) | 4 (0.040) | 4/230 | NT | 5.3% | intergenic (+449/+4) | Y75_RS10415/Y75_RS10420 | YebC/PmpR family DNA‑binding transcriptional regulator/tRNA‑Asn |
| ? | NC_007779 | 2062068 = | 72 (0.670) | intergenic (+5/+33) | Y75_RS10430/cbl | tRNA‑Asn/HTH‑type transcriptional regulator Cbl | |||||
| * | ? | NC_007779 | 2079945 = | 271 (1.440) | 19 (0.110) | 12/376 | NT | 7.7% | coding (240/375 nt) | cbtA | type IV toxin‑antitoxin system toxin CbtA |
| ? | NC_007779 | 2080119 = | 202 (1.150) | coding (43/195 nt) | Y75_RS10530 | hypothetical protein | |||||
| * | ? | NC_007779 | = 2128452 | 150 (0.800) | 8 (0.040) | 5/394 | NT | 5.2% | coding (876/966 nt) | fcl | GDP‑L‑fucose synthase |
| ? | NC_007779 | = 2128615 | 142 (0.770) | coding (713/966 nt) | fcl | GDP‑L‑fucose synthase | |||||
| * | ? | NC_007779 | = 2176982 | 0 (0.000) | 215 (1.180) | 113/390 | NT | 100% | intergenic (‑2/‑33) | gatA/Y75_RS10980 | PTS galactitol transporter subunit IIA/IS5‑like element IS5 family transposase |
| ? | NC_007779 | 2178182 = | 0 (0.000) | pseudogene (202/207 nt) | gatA | PTS galactitol transporter subunit IIA | |||||
| * | ? | NC_007779 | 2372690 = | 160 (0.850) | 10 (0.050) | 5/388 | NT | 6.4% | coding (950/969 nt) | arnC | undecaprenyl‑phosphate 4‑deoxy‑4‑formamido‑L‑arabinose transferase |
| ? | NC_007779 | 2372770 = | 137 (0.750) | coding (62/1983 nt) | arnA | bifunctional UDP‑4‑amino‑4‑deoxy‑L‑arabinose formyltransferase/UDP‑glucuronic acid oxidase ArnA | |||||
| * | ? | NC_007779 | 2496079 = | 166 (0.880) | 8 (0.040) | 7/382 | NT | 5.6% | coding (1318/1695 nt) | oxc | oxalyl‑CoA decarboxylase |
| ? | NC_007779 | 2496245 = | 113 (0.630) | coding (1152/1695 nt) | oxc | oxalyl‑CoA decarboxylase | |||||
| * | ? | NC_007779 | 2501849 = | 138 (0.740) | 39 (0.220) | 17/376 | NT | 20.5% | coding (759/921 nt) | lpxP | kdo(2)‑lipid IV(A) palmitoleoyltransferase |
| ? | NC_007779 | 2502257 = | 173 (0.980) | intergenic (+246/‑110) | lpxP/ypdK | kdo(2)‑lipid IV(A) palmitoleoyltransferase/membrane protein YpdK | |||||
| * | ? | NC_007779 | = 2503554 | 207 (1.100) | 14 (0.080) | 10/378 | NT | 8.1% | coding (188/1239 nt) | alaC | alanine transaminase |
| ? | NC_007779 | = 2503761 | 124 (0.700) | intergenic (‑20/‑356) | alaC/Y75_RS12500 | alanine transaminase/two‑component system sensor histidine kinase YpdA | |||||
| * | ? | NC_007779 | 2524563 = | 128 (0.680) | 7 (0.040) | 7/368 | NT | 5.7% | coding (284/372 nt) | Y75_RS12595 | putative DNA‑binding transcriptional regulator |
| ? | NC_007779 | 2525143 = | 114 (0.660) | coding (976/1416 nt) | gltX | glutamate‑‑tRNA ligase | |||||
| * | ? | NC_007779 | = 2562679 | 169 (0.900) | 14 (0.080) | 6/390 | NT | 8.4% | coding (65/888 nt) | Y75_RS12815 | ethanolamine ammonia‑lyase subunit beta |
| ? | NC_007779 | = 2562755 | 139 (0.760) | intergenic (‑12/+9) | Y75_RS12815/Y75_RS12820 | ethanolamine ammonia‑lyase subunit beta/ethanolamine ammonia‑lyase subunit alpha | |||||
| * | ? | NC_007779 | = 2623098 | 60 (0.320) | 6 (0.030) | 5/376 | NT | 6.1% | coding (1399/2067 nt) | ppk1 | polyphosphate kinase 1 |
| ? | NC_007779 | = 2623955 | 127 (0.720) | coding (185/1542 nt) | ppx | exopolyphosphatase | |||||
| * | ? | NC_007779 | = 2665265 | 227 (1.210) | 14 (0.080) | 6/386 | NT | 6.1% | coding (1175/1281 nt) | csiE | stationary phase inducible protein CsiE |
| ? | NC_007779 | = 2665385 | 213 (1.180) | coding (1118/1140 nt) | Y75_RS13270 | 3‑phenylpropionate MFS transporter | |||||
| * | ? | NC_007779 | = 2706119 | 100 (0.530) | 13 (0.070) | 6/388 | NT | 7.8% | coding (339/480 nt) | rseC | SoxR‑reducing system protein RseC |
| ? | NC_007779 | = 2706306 | 209 (1.150) | coding (152/480 nt) | rseC | SoxR‑reducing system protein RseC | |||||
| * | ? | NC_007779 | = 2728761 | NA (NA) | 8 (0.040) | 7/382 | NT | NA | noncoding (1053/1554 nt) | Y75_RS13580 | 16S ribosomal RNA |
| ? | NC_007779 | = 2729413 | NA (NA) | noncoding (401/1554 nt) | Y75_RS13580 | 16S ribosomal RNA | |||||
| * | ? | NC_007779 | = 2728815 | NA (NA) | 4 (0.020) | 4/388 | NT | NA | noncoding (999/1554 nt) | Y75_RS13580 | 16S ribosomal RNA |
| ? | NC_007779 | = 2729296 | NA (NA) | noncoding (518/1554 nt) | Y75_RS13580 | 16S ribosomal RNA | |||||
| * | ? | NC_007779 | = 2747640 | 181 (0.960) | 10 (0.060) | 6/382 | NT | 5.3% | coding (211/1287 nt) | Y75_RS13680 | HlyC/CorC family transporter |
| ? | NC_007779 | = 2747760 | 186 (1.040) | coding (331/1287 nt) | Y75_RS13680 | HlyC/CorC family transporter | |||||
| * | ? | NC_007779 | = 2824358 | 100 (0.530) | 8 (0.040) | 5/390 | NT | 7.0% | intergenic (‑126/‑130) | mltB/srlA | lytic murein transglycosylase B/PTS glucitol/sorbitol transporter subunit IIC |
| ? | NC_007779 | = 2824475 | 116 (0.630) | intergenic (‑243/‑13) | mltB/srlA | lytic murein transglycosylase B/PTS glucitol/sorbitol transporter subunit IIC | |||||
| * | ? | NC_007779 | = 2912751 | 168 (0.900) | 10 (0.060) | 6/378 | NT | 5.0% | coding (906/1302 nt) | rlmD | 23S rRNA (uracil(1939)‑C(5))‑methyltransferase RlmD |
| ? | NC_007779 | = 2913651 | 219 (1.240) | coding (6/1302 nt) | rlmD | 23S rRNA (uracil(1939)‑C(5))‑methyltransferase RlmD | |||||
| * | ? | NC_007779 | = 2939358 | 184 (0.980) | 11 (0.060) | 7/386 | NT | 5.3% | coding (542/1101 nt) | rlmM | 23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM |
| ? | NC_007779 | = 2939537 | 218 (1.200) | coding (363/1101 nt) | rlmM | 23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM | |||||
| * | ? | NC_007779 | = 2942256 | 157 (0.840) | 8 (0.040) | 8/384 | NT | 5.0% | coding (264/1206 nt) | csdA | cysteine desulfurase CsdA |
| ? | NC_007779 | = 2942295 | 152 (0.840) | coding (303/1206 nt) | csdA | cysteine desulfurase CsdA | |||||
| * | ? | NC_007779 | = 3134069 | 112 (0.600) | 16 (0.090) | 5/382 | NT | 11.9% | coding (959/1500 nt) | pitB | inorganic phosphate transporter PitB |
| ? | NC_007779 | = 3134142 | 130 (0.730) | coding (886/1500 nt) | pitB | inorganic phosphate transporter PitB | |||||
| * | ? | NC_007779 | 3419746 = | 221 (1.180) | 14 (0.080) | 9/372 | NT | 6.9% | pseudogene (850/1025 nt) | Y75_RS16995 | amino acid ABC transporter substrate‑binding protein |
| ? | NC_007779 | 3420075 = | 173 (0.990) | coding (87/1182 nt) | Y75_RS17000 | amino acid ABC transporter permease | |||||
| * | ? | NC_007779 | 3419810 = | 185 (0.990) | 18 (0.100) | 7/384 | NT | 11.0% | pseudogene (914/1025 nt) | Y75_RS16995 | amino acid ABC transporter substrate‑binding protein |
| ? | NC_007779 | 3419983 = | 113 (0.630) | intergenic (+62/‑6) | Y75_RS16995/Y75_RS17000 | amino acid ABC transporter substrate‑binding protein/amino acid ABC transporter permease | |||||
| * | ? | NC_007779 | 3584374 = | 253 (1.350) | 14 (0.080) | 5/386 | NT | 5.6% | coding (263/1374 nt) | hemN | oxygen‑independent coproporphyrinogen III oxidase |
| ? | NC_007779 | 3584488 = | 231 (1.280) | coding (149/1374 nt) | hemN | oxygen‑independent coproporphyrinogen III oxidase | |||||
| * | ? | NC_007779 | 3602500 = | 66 (0.350) | 6 (0.030) | 6/382 | NT | 6.3% | coding (1037/1452 nt) | trkH | Trk system potassium transporter TrkH |
| ? | NC_007779 | 3602588 = | 114 (0.640) | coding (949/1452 nt) | trkH | Trk system potassium transporter TrkH | |||||
| * | ? | NC_007779 | = 3746805 | 30 (0.160) | 4 (0.020) +25 bp |
4/350 | NT | 23.4% | pseudogene (104/375 nt) | Y75_RS18580 | tryptophan permease |
| ? | NC_007779 | = 3746914 | 0 (0.000) | intergenic (‑6/‑29) | Y75_RS18580/Y75_RS18585 | tryptophan permease/IS5‑like element IS5 family transposase | |||||
| * | ? | NC_007779 | = 3746910 | 0 (0.000) | 149 (0.810) | 81/392 | NT | 100% | intergenic (‑2/‑33) | Y75_RS18580/Y75_RS18585 | tryptophan permease/IS5‑like element IS5 family transposase |
| ? | NC_007779 | 3748110 = | 0 (0.000) | pseudogene (871/873 nt) | tnaB | low affinity tryptophan permease TnaB | |||||
| * | ? | NC_007779 | 3748316 = | 2 (0.010) | 229 (1.220) | 117/400 | NT | 99.1% | pseudogene (665/873 nt) | tnaB | low affinity tryptophan permease TnaB |
| ? | NC_007779 | = 4056987 | NA (NA) | coding (391/417 nt) | Y75_RS20060 | hypothetical protein | |||||
| * | ? | NC_007779 | = 3748324 | 3 (0.020) | 192 (1.020) | 110/400 | NT | 98.5% | pseudogene (657/873 nt) | tnaB | low affinity tryptophan permease TnaB |
| ? | NC_007779 | 4056220 = | NA (NA) | intergenic (‑209/+15) | Y75_RS25055/Y75_RS20055 | hypothetical protein/IS1‑like element IS1A family transposase | |||||
| * | ? | NC_007779 | = 3750590 | 0 (0.000) | 205 (1.120) | 102/392 | NT | 100% | intergenic (‑104/‑33) | tnaA/Y75_RS18600 | tryptophanase/IS5‑like element IS5 family transposase |
| ? | NC_007779 | 3751790 = | 0 (0.000) | intergenic (+151/+116) | Y75_RS18600/tnaC | IS5‑like element IS5 family transposase/tryptophanase leader peptide | |||||
| * | ? | NC_007779 | 3875587 = | NA (NA) | 5 (0.030) | 5/382 | NT | 100% | coding (2646/4134 nt) | Y75_RS19225 | RHS element protein RhsA |
| ? | NC_007779 | 3875864 = | 0 (0.000) | coding (2369/4134 nt) | Y75_RS19225 | RHS element protein RhsA | |||||
| * | ? | NC_007779 | = 3876257 | NA (NA) | 8 (0.040) | 6/396 | NT | 100% | coding (1976/4134 nt) | Y75_RS19225 | RHS element protein RhsA |
| ? | NC_007779 | = 3876676 | 0 (0.000) | coding (1557/4134 nt) | Y75_RS19225 | RHS element protein RhsA | |||||
| * | ? | NC_007779 | = 3876426 | 148 (0.790) | 8 (0.050) | 5/378 | NT | 8.6% | coding (1807/4134 nt) | Y75_RS19225 | RHS element protein RhsA |
| ? | NC_007779 | = 3876544 | 31 (0.170) | coding (1689/4134 nt) | Y75_RS19225 | RHS element protein RhsA | |||||
| * | ? | NC_007779 | = 3898201 | 230 (1.230) | 42 (0.240) | 8/374 | NT | 15.8% | coding (319/849 nt) | yiaJ | IclR family transcriptional regulator YiaJ |
| ? | NC_007779 | = 3898501 | 232 (1.320) | coding (619/849 nt) | yiaJ | IclR family transcriptional regulator YiaJ | |||||
| * | ? | NC_007779 | 3966102 = | 197 (1.050) | 16 (0.090) | 10/380 | NT | 7.9% | coding (952/1014 nt) | yhjD | inner membrane protein YhjD |
| ? | NC_007779 | 3966286 = | 185 (1.040) | coding (768/1014 nt) | yhjD | inner membrane protein YhjD | |||||
| * | ? | NC_007779 | 3970002 = | 162 (0.860) | 10 (0.050) | 5/388 | NT | 5.7% | coding (822/1650 nt) | treF | alpha,alpha‑trehalase TreF |
| ? | NC_007779 | 3970183 = | 171 (0.940) | coding (641/1650 nt) | treF | alpha,alpha‑trehalase TreF | |||||
| * | ? | NC_007779 | 4032736 = | 136 (0.720) | 9 (0.050) | 5/382 | NT | 6.1% | coding (1229/2199 nt) | zntA | Zn(II)/Cd(II)/Pb(II) translocating P‑type ATPase ZntA |
| ? | NC_007779 | 4032846 = | 148 (0.830) | coding (1119/2199 nt) | zntA | Zn(II)/Cd(II)/Pb(II) translocating P‑type ATPase ZntA | |||||
| * | ? | NC_007779 | 4051194 = | 235 (1.250) | 17 (0.100) | 6/376 | NT | 7.9% | coding (807/846 nt) | ugpE | sn‑glycerol‑3‑phosphate ABC transporter permease UgpE |
| ? | NC_007779 | 4051992 = | 174 (0.990) | coding (758/1071 nt) | Y75_RS20030 | sn‑glycerol 3‑phosphate ABC transporter ATP binding protein UgpC | |||||
| * | ? | NC_007779 | 4056221 = | NA (NA) | 166 (0.890) | 87/398 | NT | 98.8% | intergenic (‑210/+14) | Y75_RS25055/Y75_RS20055 | hypothetical protein/IS1‑like element IS1A family transposase |
| ? | NC_007779 | 4370787 = | 2 (0.010) | pseudogene (667/1304 nt) | Y75_RS21600 | anaerobic C4‑dicarboxylate transporter | |||||
| * | ? | NC_007779 | = 4056987 | NA (NA) | 259 (1.380) | 129/400 | NT | 98.5% | coding (391/417 nt) | Y75_RS20060 | hypothetical protein |
| ? | NC_007779 | = 4370795 | 4 (0.020) | pseudogene (659/1304 nt) | Y75_RS21600 | anaerobic C4‑dicarboxylate transporter | |||||
| * | ? | NC_007779 | 4094354 = | 182 (0.970) | 10 (0.060) | 4/386 | NT | 5.3% | coding (439/576 nt) | nfuA | Fe‑S biogenesis protein NfuA |
| ? | NC_007779 | 4094509 = | 183 (1.010) | coding (284/576 nt) | nfuA | Fe‑S biogenesis protein NfuA | |||||
| * | ? | NC_007779 | 4185837 = | 191 (1.020) | 12 (0.070) | 7/390 | NT | 5.9% | coding (820/1470 nt) | gspA | type II secretion system protein GspA |
| ? | NC_007779 | 4185923 = | 200 (1.090) | coding (906/1470 nt) | gspA | type II secretion system protein GspA | |||||
| * | ? | NC_007779 | = 4218386 | 172 (0.920) | 18 (0.100) | 6/378 | NT | 8.4% | coding (517/930 nt) | metA | homoserine O‑succinyltransferase |
| ? | NC_007779 | = 4218577 | 229 (1.290) | coding (708/930 nt) | metA | homoserine O‑succinyltransferase | |||||
| * | ? | NC_007779 | = 4268802 | 186 (0.990) | 12 (0.070) | 5/386 | NT | 5.7% | coding (899/1416 nt) | Y75_RS21135 | replicative DNA helicase |
| ? | NC_007779 | = 4269031 | 215 (1.190) | coding (1128/1416 nt) | Y75_RS21135 | replicative DNA helicase | |||||
| * | ? | NC_007779 | 4283490 = | 292 (1.560) | 17 (0.090) | 5/384 | NT | 6.4% | intergenic (+72/‑80) | Y75_RS21200/Y75_RS21205 | guanine/hypoxanthine transporter GhxP/Na+/H+ antiporter |
| ? | NC_007779 | 4283560 = | 220 (1.220) | intergenic (+142/‑10) | Y75_RS21200/Y75_RS21205 | guanine/hypoxanthine transporter GhxP/Na+/H+ antiporter | |||||
| * | ? | NC_007779 | = 4302160 | 157 (0.840) | 16 (0.090) | 7/382 | NT | 9.8% | coding (686/2148 nt) | fdhF | formate dehydrogenase subunit alpha |
| ? | NC_007779 | = 4302413 | 146 (0.820) | coding (433/2148 nt) | fdhF | formate dehydrogenase subunit alpha | |||||
| * | ? | NC_007779 | = 4310362 | 0 (0.000) | 178 (0.970) | 88/392 | NT | 100% | intergenic (‑286/‑33) | yjcS/Y75_RS21310 | alkyl sulfatase YjcS/IS5‑like element IS5 family transposase |
| ? | NC_007779 | 4311562 = | 0 (0.000) | pseudogene (916/921 nt) | alsK | allose kinase | |||||
| * | ? | NC_007779 | 4310363 = | NA (NA) | 144 (0.770) | 90/400 | NT | 100% | intergenic (‑287/‑32) | yjcS/Y75_RS21310 | alkyl sulfatase YjcS/IS5‑like element IS5 family transposase |
| ? | NC_007779 | 4544235 = | 0 (0.000) | intergenic (‑54/‑1402) | nanC/fimB | N‑acetylneuraminic acid outer membrane channel NanC/type 1 fimbria regulatory protein FimB | |||||
| * | ? | NC_007779 | = 4311557 | NA (NA) | 6 (0.030) | 6/400 | NT | 6.2% | pseudogene (921/921 nt) | alsK | allose kinase |
| ? | NC_007779 | 4331615 = | 90 (0.480) | intergenic (‑203/‑198) | Y75_RS21430/crfC | phnA family protein/clamp‑binding protein CrfC | |||||
| * | ? | NC_007779 | = 4311557 | NA (NA) | 162 (0.860) | 95/400 | NT | 100% | pseudogene (921/921 nt) | alsK | allose kinase |
| ? | NC_007779 | = 4544238 | 0 (0.000) | intergenic (‑57/‑1399) | nanC/fimB | N‑acetylneuraminic acid outer membrane channel NanC/type 1 fimbria regulatory protein FimB | |||||
| * | ? | NC_007779 | 4321315 = | 129 (0.690) | 5 (0.030) | 5/376 | NT | 5.1% | coding (582/1137 nt) | phnM | alpha‑D‑ribose 1‑methylphosphonate 5‑triphosphate diphosphatase |
| ? | NC_007779 | 4321501 = | 63 (0.360) | coding (396/1137 nt) | phnM | alpha‑D‑ribose 1‑methylphosphonate 5‑triphosphate diphosphatase | |||||
| * | ? | NC_007779 | 4453169 = | 167 (0.890) | 18 (0.100) | 11/380 | NT | 6.7% | coding (43/252 nt) | Y75_RS22045 | type II toxin‑antitoxin system antitoxin ChpS |
| ? | NC_007779 | 4453509 = | 346 (1.940) | coding (138/351 nt) | chpB | endoribonuclease toxin ChpB | |||||
| * | ? | NC_007779 | 4455726 = | 159 (0.850) | 13 (0.070) | 5/388 | NT | 7.5% | intergenic (+128/‑12) | ytfQ/Y75_RS22065 | galactofuranose ABC transporter substrate‑binding protein YtfQ/sugar ABC transporter ATP‑binding protein |
| ? | NC_007779 | 4455800 = | 167 (0.920) | coding (63/1503 nt) | Y75_RS22065 | sugar ABC transporter ATP‑binding protein | |||||
| * | ? | NC_007779 | = 4470814 | 174 (0.930) | 13 (0.070) | 4/392 | NT | 7.0% | coding (47/1422 nt) | treB | PTS trehalose transporter subunit IIBC |
| ? | NC_007779 | = 4470885 | 173 (0.940) | intergenic (‑25/+94) | treB/treR | PTS trehalose transporter subunit IIBC/trehalose operon repressor | |||||