Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
20 1 3
22 1 3
23 1 3
4 4 10

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 17 42
Multiple Base Substitutions 0 0
Deletions 9 54
Insertions 3 20
Mobile Element Insertions 5 23
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 34 139

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 12 0 24.3 471414 95.8% 451614 257.0
A20 F176 I0 R1 31 0 105.6 1774576 98.2% 1742633 266.6
A20 F176 I1 R1 13 0 54.4 1989668 90.4% 1798659 142.9
A20 F176 I2 R1 15 0 37.3 1350312 90.6% 1223382 142.9
A22 F178 I0 R1 40 0 58.9 1016878 97.7% 993489 262.1
A22 F178 I1 R1 13 0 73.4 2645172 90.8% 2401816 142.5
A22 F178 I2 R1 12 0 53.2 1911620 90.9% 1737662 142.6
A23 F176 I0 R1 30 0 92.4 1538930 98.4% 1514307 272.0
A23 F176 I1 R1 12 0 38.6 1402628 89.8% 1259559 142.8
A23 F176 I2 R1 12 0 37.0 1353224 89.4% 1209782 142.8

Mutation Needle Plot

Mutation Targets

Entries to show