Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 3 3
2 3 3
3 3 3
4 3 3
5 13 13

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 20 53
Multiple Base Substitutions 0 0
Deletions 7 43
Insertions 0 0
Mobile Element Insertions 6 17
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 33 113

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 6 0 127.4 4288862 93.2% 3997219 148.1
A1 F11 I1 R1 13 0 43.3 1732204 95.7% 1657719 122.3
A1 F33 I1 R1 14 0 30.3 1339016 95.2% 1274743 112.0
A1 F72 I1 R1 13 0 98.9 3382490 97.5% 3297927 140.1
A2 F11 I1 R1 13 0 43.1 1622188 96.5% 1565411 127.3
A2 F33 I1 R1 20 0 35.1 1378992 95.0% 1310042 124.1
A2 F73 I1 R1 14 0 105.1 3601628 97.3% 3504384 140.4
A3 F12 I1 R1 15 0 34.7 1364998 95.3% 1300843 125.1
A3 F34 I1 R1 14 0 36.8 1424632 95.4% 1359098 126.1
A3 F75 I1 R1 17 0 101.0 3428476 97.2% 3332478 141.5
A4 F9 I1 R1 14 0 36.8 1385066 95.5% 1322738 129.6
A4 F30 I1 R1 14 0 32.7 1267382 95.3% 1207815 125.3
A4 F70 I1 R1 16 0 99.6 3381834 97.7% 3304051 141.0

Mutation Needle Plot

Mutation Targets

Entries to show