Publication: None
ALE replicate | Flask count | Isolate count |
---|---|---|
0 | 1 | 2 |
13 | 4 | 7 |
15 | 4 | 8 |
3 | 9 | 17 |
Mutation Type | Unique | Observed |
---|---|---|
Single Base Substitutions | 34 | 159 |
Multiple Base Substitutions | 1 | 1 |
Deletions | 3 | 18 |
Insertions | 4 | 5 |
Mobile Element Insertions | 0 | 0 |
Amplifications | 0 | 0 |
Gene Conversions | 0 | 0 |
Inversions | 0 | 0 |
Total | 42 | 183 |
ALE, Flask, Isolate | Predicted Mutations | Unassigned Missing Coverage Evidence | Mean Coverage | Total Reads | Percent Mapped | Mapped Reads | Average Read Length |
---|---|---|---|---|---|---|---|
A0 F0 I0 R1 | 26 | 0 | 340.5 | 11737388 | 98.1% | 11514377 | 90.8 |
A0 F0 I1 R1 | 12 | 0 | 380.8 | 13201512 | 98.4% | 12990287 | 90.8 |
A13 F16 I1 R1 | 9 | 0 | 36.6 | 809542 | 98.0% | 793351 | 141.0 |
A13 F40 I0 R1 | 17 | 0 | 35.0 | 784744 | 95.0% | 745506 | 140.8 |
A13 F40 I1 R1 | 12 | 0 | 34.5 | 773110 | 93.2% | 720538 | 148.0 |
A13 F55 I0 R1 | 26 | 0 | 48.4 | 1146576 | 93.4% | 1070901 | 139.9 |
A13 F55 I1 R1 | 12 | 0 | 36.0 | 825780 | 91.1% | 752285 | 148.0 |
A13 F68 I0 R1 | 25 | 0 | 50.4 | 1217238 | 93.3% | 1135683 | 133.9 |
A13 F68 I1 R1 | 13 | 0 | 30.2 | 709236 | 94.0% | 666681 | 140.9 |
A15 F17 I0 R1 | 21 | 0 | 55.4 | 1282596 | 94.8% | 1215901 | 140.9 |
A15 F17 I1 R1 | 9 | 0 | 35.1 | 776774 | 98.1% | 762015 | 141.0 |
A15 F40 I0 R1 | 13 | 0 | 14.1 | 329232 | 94.7% | 311782 | 135.8 |
A15 F40 I1 R1 | 11 | 0 | 154.7 | 3977138 | 89.4% | 3555561 | 134.7 |
A15 F54 I0 R1 | 17 | 0 | 21.8 | 494604 | 94.9% | 469379 | 140.9 |
A15 F54 I1 R1 | 12 | 0 | 114.1 | 2913296 | 89.9% | 2619053 | 134.8 |
A15 F70 I0 R1 | 32 | 0 | 71.1 | 1611198 | 94.9% | 1529026 | 139.9 |
A15 F70 I1 R1 | 16 | 0 | 113.5 | 2638332 | 93.5% | 2466840 | 136.1 |