Notes

Publication:

10.15252/msb.20188462

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 3 4
2 3 4
2 6 8

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 10 24
Multiple Base Substitutions 0 0
Deletions 7 17
Insertions 0 0
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 17 41

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F9 I1 R1 7 0 72.1 1398008 85.5% 1195296 269.6
A1 F48 I1 R1 7 0 77.0 1495442 84.4% 1262153 269.6
A1 F78 I0 R1 29 0 127.6 2403560 86.5% 2079079 293.0
A1 F78 I1 R1 10 0 75.0 1406320 86.9% 1222092 273.6
A2 F6 I1 R1 8 0 78.8 1499246 88.4% 1325333 273.2
A2 F27 I1 R1 10 0 115.2 2149002 91.4% 1964187 265.0
A2 F70 I0 R1 65 0 109.9 2395966 73.8% 1768222 293.0
A2 F70 I1 R1 10 0 85.0 1580010 88.6% 1399888 268.6

Mutation Needle Plot

Mutation Targets

Entries to show