Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
23 3 5
24 3 5
2 6 10

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 9 38
Multiple Base Substitutions 0 0
Deletions 9 46
Insertions 1 1
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 19 85

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A23 F0 I0 R1 39 0 209.0 4017998 95.2% 3825134 250.5
A23 F1 I0 R1 42 0 162.0 3154480 92.8% 2927357 251.4
A23 F184 I0 R1 35 0 87.4 1465572 98.5% 1443588 267.8
A23 F184 I1 R1 9 0 47.5 1660340 94.1% 1562379 142.2
A23 F184 I2 R1 8 0 43.7 1528396 93.8% 1433635 142.5
A24 F1 I0 R1 45 0 158.3 3171863 96.7% 3067191 240.5
A24 F2 I0 R1 16 0 40.3 777878 98.1% 763098 248.5
A24 F184 I0 R1 44 0 89.3 1534052 98.3% 1507973 261.3
A24 F184 I1 R1 9 0 42.2 1471776 94.3% 1387884 142.5
A24 F184 I2 R1 9 0 58.0 2030262 94.7% 1922658 141.1

Mutation Needle Plot

Mutation Targets

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