Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 2 6
2 3 7

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 36 230
Multiple Base Substitutions 8 53
Deletions 17 119
Insertions 21 137
Mobile Element Insertions 0 0
Amplifications 9 11
Gene Conversions 0 0
Inversions 0 0
Total 91 550

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 79 0 174.0 3205292 67.0% 2147545 249.0
A1 F5 I1 R1 78 0 127.5 2529076 62.2% 1573085 249.0
A1 F5 I1 R2 78 0 169.2 3172544 65.8% 2087533 249.0
A1 F5 I1 R3 78 0 156.9 3019642 64.1% 1935590 249.0
A1 F7 I1 R1 79 0 138.4 2729636 62.5% 1706022 249.0
A1 F7 I1 R2 78 0 133.5 2595148 63.4% 1645323 249.0
A1 F7 I1 R3 80 0 133.7 2641612 62.4% 1648365 249.0

Mutation Needle Plot

Mutation Targets

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