Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
10 2 3
11 2 3
12 2 3
13 2 3
14 2 3
15 2 3
7 13 19

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 20 65
Multiple Base Substitutions 0 0
Deletions 1 19
Insertions 0 0
Mobile Element Insertions 1 1
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 22 85

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I0 R1 99 0 113.5 3954416 97.9% 3871373 136.5
A10 F21 I1 R1 4 0 126.5 4415100 98.7% 4357703 135.0
A10 F64 I0 R1 409 0 63.1 2344228 95.5% 2238737 135.4
A10 F64 I1 R1 3 0 177.0 6166516 98.6% 6080184 135.6
A11 F20 I1 R1 4 0 104.2 3663202 98.4% 3604590 134.6
A11 F64 I0 R1 416 0 84.5 3064920 96.6% 2960712 135.7
A11 F64 I1 R1 3 0 167.8 5874612 98.3% 5774743 135.3
A12 F20 I1 R1 3 0 108.6 3788698 98.8% 3743233 135.2
A12 F63 I0 R1 227 0 97.7 3613754 96.1% 3472817 135.9
A12 F63 I1 R1 4 0 197.6 6886624 98.7% 6797097 135.6
A13 F20 I1 R1 4 0 116.2 4044178 98.9% 3999692 135.4
A13 F64 I0 R1 334 0 49.4 1968632 94.1% 1852482 134.9
A13 F64 I1 R1 4 0 176.3 6148682 98.7% 6068749 135.3
A14 F22 I1 R1 4 0 110.0 3852834 98.3% 3787335 135.3
A14 F65 I0 R1 86 0 259.7 8019954 97.7% 7835495 136.2
A14 F65 I1 R1 5 0 156.5 5480966 98.5% 5398751 135.2
A15 F20 I1 R1 3 0 94.7 3295114 98.9% 3258867 135.4
A15 F64 I0 R1 160 0 79.1 3727730 96.4% 3593531 135.8
A15 F64 I1 R1 4 0 152.9 5325952 98.7% 5256714 135.6

Mutation Needle Plot

Mutation Targets

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